Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3470 |
Symbol | |
ID | 5324358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3678667 |
End bp | 3679932 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792422 |
Product | major facilitator transporter |
Protein accession | YP_001329123 |
Protein GI | 150398656 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAGAT CGGGTTCGTC GCTGCTGTCG ATCGCGAGCA TCGTCGCCTC GATGACGTCT GTCGCGGTCG GAAACGGCAT GATGCTCGCC TATGTACCCT TCGTTTTGAC GCGTTCGACG GCGCCGGACT GGGTTGCGGG CGCTGCGGTG ACGGCGATTG CCTTCGGCAG CCTGATCGGC TGTCTCATGG GTGGCTCGCT CATTCGCCGC GTCGGCCATG CCCGGGCGTT TTCCTGCTCC ATGGCGCTCG TCATACTGGC GGCGCTGACG ATCAGCCTCG GCGTTCATCC GCTGCTCTGG GTGGTTGCAC GCGGGCTCTA CGGCATTGCC GCCAGCATGA ATTTCATCAT CACACAAAGC TGGCTGAACC ATGTCAGCGA GAACCACCGG CGCGGCCGGG CGATGGCGCT CTTCTACATG GCCTACGTCA TCGGCCTCGG CGCCGGCGCC TGGCTCTTCG GTCAGATCCC GTCCGAGGGC AATCTCGCGC CCGTCATCAC GATCTTCTTC ACCGCGCTCG CCATTCTGCC GATTGGCCTG ACGCGGCTGC CGACCCCGCC CGCCCCCGCC AGGGTCAGCA TTGATATTCC GATGGTCTGG CGCATTTCCC CGGTCGCCTT CGTCGGCGTG CTTGCGTCCG GCGGCCTCTC CATGCTGGTA CAGGGCTTCA CGCCCATCTA TGCGGCCGCC AACTCGGTCA GCCAGAAAGA CGTGGCGGCC TTGATGTTCG TGATGCAGTT CGGCCTGCTC TTCATTCAGT ATCCGCTGGG CGCCCTCTCC GACCGCACCG ACCGGCGGAT CGTCATGGTC GTCACCTGTG CGCTCGTCAT CGCGGCGGGC TTTGCTGCGC TCGCCGTCTC CTTCGACAAC CTCATCCTGC TCATGCTGGT TTTCGCGATC TTCGCCGGGG CAGTCGAGAC GGTCTATTCG ATTGCCAATG CGCATGCCAA CGATCGCACC GAGCCGGCGG ATTTCGTGCC GCTCGCCAGC ACCATGCTGA TCGCCTGGTC GGCGTCGGCG ACGCTGGTGC CGATGCTCGT GACACTGCTG ACGCCGGCCT TCGGTGAGCG CACTTTCATC TATGCGACGA TGACGGTGGC GCTCCTCTAT GCGCTGTTCG TGCTCGTTCG CCTCCTGTCG CGCGAACGCG TCCCGCCCGA ACTGTGCGAA TCCTTTGAGT TCAAAAGCGC GCAGGTGCCG AACGCCGCAG CTCTTGGCGA GACCGAGGCA CACGCGGAAT GCCCGCCCCG GCGCCCGGAT TTATAG
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Protein sequence | MDRSGSSLLS IASIVASMTS VAVGNGMMLA YVPFVLTRST APDWVAGAAV TAIAFGSLIG CLMGGSLIRR VGHARAFSCS MALVILAALT ISLGVHPLLW VVARGLYGIA ASMNFIITQS WLNHVSENHR RGRAMALFYM AYVIGLGAGA WLFGQIPSEG NLAPVITIFF TALAILPIGL TRLPTPPAPA RVSIDIPMVW RISPVAFVGV LASGGLSMLV QGFTPIYAAA NSVSQKDVAA LMFVMQFGLL FIQYPLGALS DRTDRRIVMV VTCALVIAAG FAALAVSFDN LILLMLVFAI FAGAVETVYS IANAHANDRT EPADFVPLAS TMLIAWSASA TLVPMLVTLL TPAFGERTFI YATMTVALLY ALFVLVRLLS RERVPPELCE SFEFKSAQVP NAAALGETEA HAECPPRRPD L
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