| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3456 |
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| Symbol | |
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| ID | 5324343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3663656 |
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| End bp | 3665026 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792407 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001329109 |
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| Protein GI | 150398642 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCACG GCTCGAACCC GCGACCCGCC ACCGCACGCA AGTCTTCCGA CCTCAAGGGC
ACGGTGCGCA TCCCGGGCGA CAAGTCGATC TCGCACCGCT CCTTCATGTT CGGCGGCCTT
GCTTCGGGTG AGACGCGCAT CACCGGACTC CTCGAAGGCG AAGACGTGAT CAATACCGGC
AGGGCCATGC AGGCGATGGG TGCCAAAATT CGCAAGGAGG GCGACACCTG GATCATCGAC
GGCGTCGGGA ACGGTGCGCT GCTCGCGCCC GAGGCGCCGC TCGACTTCGG CAATGCGGGA
ACCGGCTGCC GTCTGACCAT GGGCCTCGTC GGCGTCTATG ATTTCGATTC CACCTTCATC
GGCGACGCCT CGCTGACGAA GCGCCCGATG GGCCGCGTGC TCGATCCGCT CCGCGAAATG
GGTGTCCAGG TGAAGTCGGC CGAGGGCGAC CGGTTGCCGG TGACGCTGCG CGGACCGAAG
ACGCCGAACC CGATCACCTA TCGCGTGCCG ATGGCTTCGG CCCAGGTGAA ATCCGCCGTG
CTGCTCGCCG GGCTGAACAC GCCCGGCATC ACCACCGTCG TCGAGCCGGT AATGACCCGC
GACCATACGG AAAAGATGCT CCAGGGCTTC GGCGCGGACC TTTCGGTCGA GACCGACAGA
GACGGCGTGC GCACCATCCG GCTCGAAGGC CGAGGCAAGC TGAGGGGTCA GGTGATCGAC
GTGCCGGGCG ATCCGTCTTC CACGGCCTTT CCGCTGGTGG CGGCGCTTCT TGTGCCGGGG
TCCGACCTTA GCATTTTCAA CGTGCTGATG AACCCGACCC GTACAGGGCT CATTCTAACG
CTTCAGGAAA TGGGTGCCAG GATCGAAGTG CTGAGCAGCC GGCTTGCCGG TGGCGAGGAT
GTCGCCGATC TGCGCGTACG CTATTCGGAA CTCAAGGGCG TGACGGTACC GGAAGAGCGC
GCACCCTCGA TGATCGACGA ATATCCCGTG CTTGCCGTCG CGGCCGCCTT CGCCGAAGGC
GCAACGGTGA TGAACGGGCT GGAGGAACTG AGGGTCAAGG AATCCGATCG CCTGTCCGCC
GTTGCCGAGG GACTGAAGCT CAACGGCGTC GATTGCGACG AGGGCGAGGC CTCGCTCGTC
GTACGCGGCC GGCCGGGCGG CAAGGGCCTG GGCAATGATT CGGGCGGCCA GGTCAAAACC
CATCTCGATC ACCGCATCGC CATGAGCTTC CTTGTCATGG GGCTTGCCTC GGAGCGTCCG
GTGACGGTCG ACGATGCGAC GATGATCGCG ACGTCCTTCC CCGAGTTCAT GGGACTGATG
ACAGGGTTGG GCGCGAAGAT CGAAGAGACG GAAAACAAGG CGGCCCTATG A
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| Protein sequence | MSHGSNPRPA TARKSSDLKG TVRIPGDKSI SHRSFMFGGL ASGETRITGL LEGEDVINTG
RAMQAMGAKI RKEGDTWIID GVGNGALLAP EAPLDFGNAG TGCRLTMGLV GVYDFDSTFI
GDASLTKRPM GRVLDPLREM GVQVKSAEGD RLPVTLRGPK TPNPITYRVP MASAQVKSAV
LLAGLNTPGI TTVVEPVMTR DHTEKMLQGF GADLSVETDR DGVRTIRLEG RGKLRGQVID
VPGDPSSTAF PLVAALLVPG SDLSIFNVLM NPTRTGLILT LQEMGARIEV LSSRLAGGED
VADLRVRYSE LKGVTVPEER APSMIDEYPV LAVAAAFAEG ATVMNGLEEL RVKESDRLSA
VAEGLKLNGV DCDEGEASLV VRGRPGGKGL GNDSGGQVKT HLDHRIAMSF LVMGLASERP
VTVDDATMIA TSFPEFMGLM TGLGAKIEET ENKAAL
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