Gene Smed_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3451 
Symbol 
ID5324337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3660338 
End bp3660760 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content59% 
IMG OID640792401 
Productferric uptake regulator family protein 
Protein accessionYP_001329104 
Protein GI150398637 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAG CAACGCACAT GTCCTCACAG GAGAGACTGC GCAATTCGGG TTTGCGCCCG 
ACGCGCCAGC GCGTCGCGCT TGCCGACCTG ATTTTCGCCA AGGGCGACCG TCACCTGACG
GTGGAGGAAC TCCATGAGGA GGCCGTCACG GCCGGCGTTC CCGTTTCGCT CGCGACCGTC
TACAACACGC TCCATCAGTT TACCGAGGCC GGTATGATCC GCGTTCTGGC CGTCGAGAGC
GCAAGGACCT ATTTCGACAC GAATGTTTCG GATCACCACC ATTTCTTCAT CGAGGGCGAG
AACGAGGTCC TCGACATCCC TGTGAGCAAT ATTCAGATCG ACAATCTCCC GGAACCGCCG
GAAGGGATGG AAATCTCCCA TGTCGACGTG GTGATCCGGC TGCGCCATAA GGTCGAGCGC
TGA
 
Protein sequence
MTKATHMSSQ ERLRNSGLRP TRQRVALADL IFAKGDRHLT VEELHEEAVT AGVPVSLATV 
YNTLHQFTEA GMIRVLAVES ARTYFDTNVS DHHHFFIEGE NEVLDIPVSN IQIDNLPEPP
EGMEISHVDV VIRLRHKVER