Gene Smed_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3449 
Symbol 
ID5324335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3658073 
End bp3659293 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID640792399 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_001329102 
Protein GI150398635 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGGG TTGTTGTAAC GGGCCTCGGG ATCGTTTCCT CGATCGGCAG CGATGCCGAC 
GAAGTCACCG CGTCGCTCCG CGATGCGCGT TCGGGCATCA CGTTTTCTCC GGATTTTGCC
GAGCACGGCT TTAAATGCCA GGTCTGGGGA GCGCCTGCGC TCGACCCGAC AGATCTGGTC
GACCGGCGCG CCATGCGCTT CCTCTCTCAG GGCGGAGCCT GGAACCATGT GGCGATGAAG
CAGGCTATCG CGGATTCCGG ATTGGAAGCC GGCGACATCA CAAACGAACG CACCGGCATC
ATAATGGGAT CGGGCGGCCC TTCGACGCGC ACGATCGTCG AAGCGGCGGA CATTACCCGC
AAGAACAACA GCCCCAAGCG CATCGGCCCC TTCGCCGTGC CAAAGGCGAT GTCGTCCACG
GCCTCCGCGA CCCTTGCGAC CTGGTTCCAG ATCCACGGCG TCAACTATTC CATCTCGTCG
GCCTGCTCGA CCTCGGCACA CTGCATCGGC AATGCCGCAG AAATGATCCA GTGGGGCAAA
CAGGACGTGA TGTTCGCCGG AGGTCACGAA GATCTCGACT GGACCATGTC AAATCTGTTC
GACGCCATGG GCGCCATGTC TTCCAAGTAT AACGATACGC CGGCAATTGC TTCCCGTGCC
TATGACGCGA ACCGCGACGG CTTCGTCATC GCCGGCGGTG CCGGTGTCCT CGTCCTGGAG
GAACTGGAGC GTGCCAAGGC GCGCGGTGCG AAGATTTACG CCGAAATCGT CGGCTACGGC
GCGACCTCGG ACGGATACGA CATGGTCGCC CCCTCCGGCG AAGGCGCCGC GCGCTGCATG
CGCCAGGCGC TCGCCACGGT GAATGGCGAT GTCGACTACA TCAATACCCA CGGCACCTCC
ACGCCGGTCG GCGATCAAAA GGAGATCGGC GCCATCCGCG AGGTCTTCGG TGAGAAGATG
CCGCATATCC AGTCCACGAA ATCGCTGACC GGTCACTCAC TCGGCGCGGC TGGTGTACAG
GAATCGATCT ACGGCCTCCT GATGATGCAG GCCGGCTTCA TCGGCGAAAG CGCTCACATC
ACCGAGCTCG ACGCCGAATT CGAAGGCGTG CCGATCGTCC GCAAGCGCAT CGACAATGCC
AGGATCGACA CGGTTCTTTC GAACTCCTTC GGCTTCGGCG GCACCAACGC GACGCTCGTC
TTCCAGCGCT ATAACGGATA A
 
Protein sequence
MRRVVVTGLG IVSSIGSDAD EVTASLRDAR SGITFSPDFA EHGFKCQVWG APALDPTDLV 
DRRAMRFLSQ GGAWNHVAMK QAIADSGLEA GDITNERTGI IMGSGGPSTR TIVEAADITR
KNNSPKRIGP FAVPKAMSST ASATLATWFQ IHGVNYSISS ACSTSAHCIG NAAEMIQWGK
QDVMFAGGHE DLDWTMSNLF DAMGAMSSKY NDTPAIASRA YDANRDGFVI AGGAGVLVLE
ELERAKARGA KIYAEIVGYG ATSDGYDMVA PSGEGAARCM RQALATVNGD VDYINTHGTS
TPVGDQKEIG AIREVFGEKM PHIQSTKSLT GHSLGAAGVQ ESIYGLLMMQ AGFIGESAHI
TELDAEFEGV PIVRKRIDNA RIDTVLSNSF GFGGTNATLV FQRYNG