Gene Smed_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3445 
SymbolrpsO 
ID5324331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3653110 
End bp3653379 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content58% 
IMG OID640792395 
Product30S ribosomal protein S15 
Protein accessionYP_001329098 
Protein GI150398631 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTAA CTGCAGAGCG CAAAGCGCAG ATCATCAAGG AATTCGCAAC CGCCGAAGGC 
GACACCGGTT CGCCGGAAGT CCAGGTTGCA ATCCTGACGG AACGGATCAA CAACCTGACC
GAACACTTCA AGGACCACAA GAAGGACAAC CATTCCCGAC GTGGCCTTCT CGCGCTGGTT
TCCAGCCGCC GCTCGCTCCT CGACTATCTG AAGAAGAAGG ACGAGGCGCG CTACACAAAG
CTGATCGGTG CCCTGGGCAT CCGTCGCTAA
 
Protein sequence
MSVTAERKAQ IIKEFATAEG DTGSPEVQVA ILTERINNLT EHFKDHKKDN HSRRGLLALV 
SSRRSLLDYL KKKDEARYTK LIGALGIRR