| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3437 |
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| Symbol | |
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| ID | 5324323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3641836 |
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| End bp | 3643491 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792387 |
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| Product | protein of unknown function DUF894 DitE |
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| Protein accession | YP_001329090 |
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| Protein GI | 150398623 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.545505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA ACCGAAAGAG ATCAGAGGTG ACGAACCGCA CATCGCCGTT GGCTCCCTTC
AGGCACGACA TCTTCCGCAC GATCTGGATC GCGAGCCTTG CTTCCAATTT CGGCGGGCTG
ATCCAGGCCG TGGGTGCGGC CTGGCTCATG ACGTCCATTT CGCAATCGGT GAACATGGTG
GCGCTGGTGC AGGCCTCGAC CTCGCTGCCG ATCATGCTCT TCTCACTCGT TTCCGGCGCG
CTTGCCGACA ATTTCGACCG GCGGCGGATC ATGCTCGTCG CTCAGAGCTT CATGCTCGCC
GTTTCGGGGC TGCTTACCGT CTGCGCCTAT TACGGTATCG TTACGCCGTG GCTTCTGCTC
ATCTTCACCT TTCTTCTCGG CTGCGGCACG GCTTTGAACA ATCCATCCTG GCAGGCTTCG
GTCGGCGACA TGGTTCCGCG TGACGACCTG CCGGCAGCGG TGGCGCTGAA CAGCATGGGA
TTCAATCTGA CCCGCAGCGT CGGCCCGGCG ATCGGCGGCG CGATCGTCGC AGCCGCGGGT
GCCGCGGCCG CCTTCGCCGC CAACACACTC AGCTATTTCG CGATCCTGTT CGCGCTTGCC
CGATGGAAAC CGGTAACCCC GGAAAACCGG CTGCCGCGCG AGACGCTCGG GCGCGCCGTT
TCCGCGGGCC TGCGCTACGT GGCGATGTCG CCCAATATCG GCAAGGTGCT CGTGCGCGGC
TTCGCCTTCG GCCTTTCGGC GAGCGCCATT CTCGCCCTGC TGCCGCTGGT GGCGCGCGAC
CTCGTCGGCG GCGGGCCGCT CACTTACGGC GTCATGCTCG GCGCCTTCGG CCTCGGCGCG
ATCGGCGGCG CGCTTTTGAG CGCAAGGCTG AGGGAATTCC TCACGAGCGA GGCGATCGTG
CGTTATGCCT TTGCCGGCTT CGCCTTCAGC GCATTGGTCA CAGCCATTAG TTCGGAAGCC
TGGCTGACCT GTCTCGTGCT CGCTGTTTCC GGCGCGTGCT GGGTGCTGGC GCTTTCGCTC
TTCAACACCA CGGTGCAGCT TTCGACACCG CGCTGGGTCG TCGGCCGGGC GCTTTCGCTC
TATCAGACGA TGACCTTCGG CGGGATCGCC GGCGGCAGTT GGCTGTGGGG TGTCACCGCC
GAACAATACG GCGCAGCCAA CGCGCTCATC GGCTCCTGTC TTCTGATGCT CGTGGGGGCG
GCGATCGGAC TGCGCTTCGC CCTGCCGGAG TTCAAGTCGC TCAACCTCGA CCCGCTCAAC
CGCTTCAACG AACCGCTGCT CGAACTCGAC CTGAAGCCGC GCAGCGGGCC GATCGTCGTC
ATGATCGATT ACGATATCGC CGATAACGAC ATACCCGAAT TCCTGAAGAC CATGGCCGAG
CGGCGGCGCA TCCGCATCCG TGACGGGGCC GGGCATTGGG CGCTCATGCG CGACCTCGAA
AACCCGACGA CCTGGACCGA GACTTATCAC GTGCCGACCT GGGTCGAATA TGTCCGCCAC
AATCAGCGCC GTACCCAGGC CGACGCCGCC ATTGGGGACA AGCTGACCGC ACTCCATCGG
GGACCGAACC CGCCGCGGGT GCACCGCATG ATCGAGCGGC AGACGATCGT TCCCGACCAT
TACGAGCGCT ACAAGCGATC CGTCGAGATG CACTGA
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| Protein sequence | MKINRKRSEV TNRTSPLAPF RHDIFRTIWI ASLASNFGGL IQAVGAAWLM TSISQSVNMV
ALVQASTSLP IMLFSLVSGA LADNFDRRRI MLVAQSFMLA VSGLLTVCAY YGIVTPWLLL
IFTFLLGCGT ALNNPSWQAS VGDMVPRDDL PAAVALNSMG FNLTRSVGPA IGGAIVAAAG
AAAAFAANTL SYFAILFALA RWKPVTPENR LPRETLGRAV SAGLRYVAMS PNIGKVLVRG
FAFGLSASAI LALLPLVARD LVGGGPLTYG VMLGAFGLGA IGGALLSARL REFLTSEAIV
RYAFAGFAFS ALVTAISSEA WLTCLVLAVS GACWVLALSL FNTTVQLSTP RWVVGRALSL
YQTMTFGGIA GGSWLWGVTA EQYGAANALI GSCLLMLVGA AIGLRFALPE FKSLNLDPLN
RFNEPLLELD LKPRSGPIVV MIDYDIADND IPEFLKTMAE RRRIRIRDGA GHWALMRDLE
NPTTWTETYH VPTWVEYVRH NQRRTQADAA IGDKLTALHR GPNPPRVHRM IERQTIVPDH
YERYKRSVEM H
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