Gene Smed_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3434 
Symbol 
ID5324320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3639042 
End bp3639653 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID640792384 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001329087 
Protein GI150398620 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG CATCGCTGCT CGTCTTTGCC GGTGCGCTTT TGATCGCCGC CGGCTCGCCG 
GGGCCGAGCA TCGCAGCGCT CGTCGCCCGT GTGCTCGCCA AAGGCGCACG TGACGTCTTG
CCTTTCCTCG CCGCCATGTG GATCGGCGAG GCGGTCTGGC TCTCCTTCGC GGTTGCCGGC
CTCGCGGCGA TCGCCGGGAC GTTCCATTGG GTTTTCGTCG CGATCAAATG GGCCGGTGTC
GCCTATCTCC TCTTTCTCGC CTGGAAAATG TGGGCGGCCG AGCCGCAAAT GCCCGGCGAA
AATATTCCGG AAACCCGGTC TTCATCGAAG ATGTTCTTCG CCGGGCTGAC GGTCACGCTC
GGCAATCCCA AGATCATGAT GTTCTATGTG GCGCTGCTTC CCTCGATCAT CGATCTCGGC
TCGGTCGGCC TCTTCGGCTG GGCAGAGTTG GTCGCCACCA TGTTCGCCGT GCTCGTCGTC
ATCGATCTGG CCTGGGTGCT GATGGCCGCG AAGGCGCGGC AGTTCCTGAA AAGCCGCCGT
GCGGTCCGGA TCGTCAACCG GGCCAGCGCC GGCACGATGG CCGGAGCGGC GGTGGCCATC
GCGGTGCGTT GA
 
Protein sequence
MSIASLLVFA GALLIAAGSP GPSIAALVAR VLAKGARDVL PFLAAMWIGE AVWLSFAVAG 
LAAIAGTFHW VFVAIKWAGV AYLLFLAWKM WAAEPQMPGE NIPETRSSSK MFFAGLTVTL
GNPKIMMFYV ALLPSIIDLG SVGLFGWAEL VATMFAVLVV IDLAWVLMAA KARQFLKSRR
AVRIVNRASA GTMAGAAVAI AVR