Gene Smed_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3396 
Symbol 
ID5324280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3601840 
End bp3602616 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID640792347 
Productmolybdopterin biosynthesis protein MoeB 
Protein accessionYP_001329052 
Protein GI150398585 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.270344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGC ATATGACGAC GGGTGCGACA CTCGCTCCTT CGGAGATTGC GCGCTATGCA 
CGCCACATCG TGCTGCCGGA AATCGGCGGC CCCGGGCAGC AGAAGCTCAA AGCGGCGCGC
GTGCTCGTCA TCGGCGCGGG CGGTCTAGGC GCGCCGGTGC TGCAGTATCT TGCGGCCGCC
GGCGTGGGTA CGCTGGGGAT CGTCGACGAC GATGTCGTCT CGTTGTCGAA CCTTCAGCGG
CAGGTCATCC ACGCCACCGA GGATATCGGC CGGGCCAAGG TCGAGAGCGC TGCCGCGGCG
ATCGACGCTC TAAACCCGCA TGTGAAGGTA ATAACGCACG CGCTGAGGCT CGGTGCCGAA
AACGCCAGGG AACTCTTCGA TGCATATGAT CTCGTCGTCG ACGGATCGGA CAATTTCGAC
ACGCGCTATC TCGCCGCCGA TACAGCCGAG GCCGCAGCCG TGGCGCTCGT CACCGGCGCC
GTCGGCCGCT TCGACGGCTC CGTCACGGTG CTGAAGCCCT ACGAGACCGA CGCGGACGGG
CATCCGAACC CCTCCTATCG CGACCTCTTC CCGGAGCCGC CGCCGCCCGG CGCAGTGCCA
AGCTGCGCCG AAGCCGGTGT TCTCGGCGCG CTCACCGGCG TCATCGGCAC ATTGCAGGCG
ATGGAGGCGA TCAAGCTTGT CACCGGCATT GGCGAGCCGC TGATCGGCCG GCTGCTGCTT
TACGATGCGC TTGCCGCGCA GTTCAACACG ATCCGCTACC GGCGCGGTAA GCGTTGA
 
Protein sequence
METHMTTGAT LAPSEIARYA RHIVLPEIGG PGQQKLKAAR VLVIGAGGLG APVLQYLAAA 
GVGTLGIVDD DVVSLSNLQR QVIHATEDIG RAKVESAAAA IDALNPHVKV ITHALRLGAE
NARELFDAYD LVVDGSDNFD TRYLAADTAE AAAVALVTGA VGRFDGSVTV LKPYETDADG
HPNPSYRDLF PEPPPPGAVP SCAEAGVLGA LTGVIGTLQA MEAIKLVTGI GEPLIGRLLL
YDALAAQFNT IRYRRGKR