Gene Smed_3394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3394 
Symbol 
ID5324278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3599805 
End bp3600449 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID640792345 
Producthypothetical protein 
Protein accessionYP_001329050 
Protein GI150398583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCC TGTTTCGCAA GCTCCTCCCC CGGGAAGATC GTTTCTTCGA CCTCTTCGCC 
GAACATTCGC GCACCGTCAT GAGTGCAGCG GAATCATTGA ATGCGCTGCT CGCCGGCGGA
CCGGACATCG AGAGCCATTG CGAACGGATC GTCACGCTCG AGAACGAGGC CGACGACATC
ACCCGCGCGG TCCTTCTCGC GGTGCGCCGC AGCTTCATCA CGCCCTTCGA CCGCGGTGAC
ATCAAGGATC TCATTCAATC GATGGACGAC GCCATCGACA TGATGCACAA GACGGTGAAG
ACCATACGGC TTTACGAACA GAAGAGCTTC GACCCCGGCA TGCAGGCCAT GGGCGCTGCG
GTCGTCGAGG CCGCCCATCT CGTCGCCGAG GCCATTCCGC TCCTCAACCG TATCGGTGCC
AACGCCCAGC GCCTCAGCAC CATCGCCGAG GAGGTAACGC GCGTCGAGGG CCGCTCCGAC
GAGTTGCACG AGCAGGGTCT GAAGGATCTC TTCCAGCGCC ACGGCGCTTC CAACCCGATG
GCCTATATCA TCGGCAGCGA GATCTATGGC GAACTGGAAA AGGTCGTCGA CCGCTTTGAG
GACGTTGCAA ACGAAATCAG CGGCATCGTG ATCGAGAACG TCTGA
 
Protein sequence
MLGLFRKLLP REDRFFDLFA EHSRTVMSAA ESLNALLAGG PDIESHCERI VTLENEADDI 
TRAVLLAVRR SFITPFDRGD IKDLIQSMDD AIDMMHKTVK TIRLYEQKSF DPGMQAMGAA
VVEAAHLVAE AIPLLNRIGA NAQRLSTIAE EVTRVEGRSD ELHEQGLKDL FQRHGASNPM
AYIIGSEIYG ELEKVVDRFE DVANEISGIV IENV