Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3394 |
Symbol | |
ID | 5324278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3599805 |
End bp | 3600449 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792345 |
Product | hypothetical protein |
Protein accession | YP_001329050 |
Protein GI | 150398583 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.103625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCC TGTTTCGCAA GCTCCTCCCC CGGGAAGATC GTTTCTTCGA CCTCTTCGCC GAACATTCGC GCACCGTCAT GAGTGCAGCG GAATCATTGA ATGCGCTGCT CGCCGGCGGA CCGGACATCG AGAGCCATTG CGAACGGATC GTCACGCTCG AGAACGAGGC CGACGACATC ACCCGCGCGG TCCTTCTCGC GGTGCGCCGC AGCTTCATCA CGCCCTTCGA CCGCGGTGAC ATCAAGGATC TCATTCAATC GATGGACGAC GCCATCGACA TGATGCACAA GACGGTGAAG ACCATACGGC TTTACGAACA GAAGAGCTTC GACCCCGGCA TGCAGGCCAT GGGCGCTGCG GTCGTCGAGG CCGCCCATCT CGTCGCCGAG GCCATTCCGC TCCTCAACCG TATCGGTGCC AACGCCCAGC GCCTCAGCAC CATCGCCGAG GAGGTAACGC GCGTCGAGGG CCGCTCCGAC GAGTTGCACG AGCAGGGTCT GAAGGATCTC TTCCAGCGCC ACGGCGCTTC CAACCCGATG GCCTATATCA TCGGCAGCGA GATCTATGGC GAACTGGAAA AGGTCGTCGA CCGCTTTGAG GACGTTGCAA ACGAAATCAG CGGCATCGTG ATCGAGAACG TCTGA
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Protein sequence | MLGLFRKLLP REDRFFDLFA EHSRTVMSAA ESLNALLAGG PDIESHCERI VTLENEADDI TRAVLLAVRR SFITPFDRGD IKDLIQSMDD AIDMMHKTVK TIRLYEQKSF DPGMQAMGAA VVEAAHLVAE AIPLLNRIGA NAQRLSTIAE EVTRVEGRSD ELHEQGLKDL FQRHGASNPM AYIIGSEIYG ELEKVVDRFE DVANEISGIV IENV
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