| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3386 |
|---|
| Symbol | |
|---|
| ID | 5324270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 3589318 |
|---|
| End bp | 3590205 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640792337 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329042 |
|---|
| Protein GI | 150398575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCA AGGCAAACGG TTACGTCTTC ACGCTGCTGG CGATCGTCAT CTTCGCGATG
CAGGACGGCA TCTCGAAGCA TCTGGCTGCT CTCTATCCGC CCGTCTTCGT CGCGATGATC
CGCTATTGGG CCTTTGCCGG CTTTGCCGCG GTGCTCGCGG CGCGGGCACC GGGCGGGTTT
GCCGCGACAA TGGTGACGAA AAAACCGCTC ATTCAGCTCC TGCGCGGCGT GCTGCTGCCG
GTGCAGATCG TCCTGGTGAT CACGTCATTC ACCATCGTCG GGCTGGCGCA GTCGCAGGCG
ATCCTCGCAG CCACGCCGCT CTTCGTGGCG CTTCTGTCGA TGCCGCTGCT CGGCGAACGG
GTGGGATGGC GGCGCTGGTC GGCGATTTCC GTTGGTCTTC TCGGCGTTCT CCTGATCCTT
CGGCCGGAAG ACGGCTCGTT CAACGTGAAT TTTCTGCTGC CGCTGGCGGC GGCGGTGATG
TTCGCCTTCT ATGTCATCAC CACCAGGCTT GCCAGCCGCG GCGACTCTGC GGTGACCAGC
TTCTTCTATA CCGGCGTCGT CGGCGCCTTC GCGATCACTC TCGTCGGCCC CTTCTTCTGG
GCAACGCTTT CCGGCACGGA CTGGGTCTGG ATGGTGCTGC TCTGCATCAC CGGCACGTCG
AGCCATTATT TTCTGATCCG CGCCTATGAC ATGCTCGATG CGGCCGCGGT CCAGCCGCTG
ACCTACCTGC AGCTCGTCTT CGCCTCGGTC ATGGGCGTGA CGATCTTCGG CGAGACGCTG
ACGACGAACA TGGTCTTCGG TTCGGTGCTG GTGGTTGCCG CCGGCATCTT CACCATCTGG
CGCGAACATG TCGTCAGCCG GCGAAAATCC GGACTGCCGC CGCAGTAA
|
|---|
| Protein sequence | MTPKANGYVF TLLAIVIFAM QDGISKHLAA LYPPVFVAMI RYWAFAGFAA VLAARAPGGF
AATMVTKKPL IQLLRGVLLP VQIVLVITSF TIVGLAQSQA ILAATPLFVA LLSMPLLGER
VGWRRWSAIS VGLLGVLLIL RPEDGSFNVN FLLPLAAAVM FAFYVITTRL ASRGDSAVTS
FFYTGVVGAF AITLVGPFFW ATLSGTDWVW MVLLCITGTS SHYFLIRAYD MLDAAAVQPL
TYLQLVFASV MGVTIFGETL TTNMVFGSVL VVAAGIFTIW REHVVSRRKS GLPPQ
|
|---|
| |