Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3375 |
Symbol | |
ID | 5324259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3576850 |
End bp | 3577560 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792326 |
Product | endonuclease III |
Protein accession | YP_001329031 |
Protein GI | 150398564 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGC GGCAGCGCAG TGCCTACAGC ACCGAGGAAG TGGAGGAGAT CTTTCGCCGC TTTTCCGTTC AGCGCCCGGA GCCGAAGGGC GAACTCGAAC ATGTCAATCC GTTCACACTG GTGGTGGCGG TCGCGCTTTC GGCGCAGGCG ACCGACGCAG GCGTCAACAA GGCGACGCGG GCGCTCTTCG CCGTCGCGGA TACGCCCGAG AAGATGCTGG CGCTCGGGGA GGAGCGCGTT CGCGACTATA TCAAGACGAT CGGTCTCTAC CGCAACAAGG CGAAAAACGT CATTGCCCTG TCCCGCAAGC TGATCACCGA CTTCGGGGGC GAGGTGCCGC GCACGCGCGA AGAGCTCGTG ACGCTGCCGG GCGTCGGGCG AAAGACAGCG AATGTGGTGC TCTCGATGGC CTTCGGCGAG GCGACCATCG CGGTCGACAC CCATATCTTC CGTATCGCCC ACCGTATCCG CATTGCACCC GGCAAGACAC CGGATGAGGT AGAGGCGCAT CTTCTGCGGG TCATCCCCGA ACACCGTCTG TACCACGCTC ATCATTGGCT GATCCTGCAC GGCCGATACG TGTGCAAGGC GCGCCGGCCG GAATGCGAGC GCTGCGTCAT TGCCGACATC TGCAAGTCGC CGGAGAAGAC CTCGGATATC CCGGCGCCGC TCGTCGAATT GCCGCCGCAG GCAATTGCCG CCGTCGGCTG A
|
Protein sequence | MSARQRSAYS TEEVEEIFRR FSVQRPEPKG ELEHVNPFTL VVAVALSAQA TDAGVNKATR ALFAVADTPE KMLALGEERV RDYIKTIGLY RNKAKNVIAL SRKLITDFGG EVPRTREELV TLPGVGRKTA NVVLSMAFGE ATIAVDTHIF RIAHRIRIAP GKTPDEVEAH LLRVIPEHRL YHAHHWLILH GRYVCKARRP ECERCVIADI CKSPEKTSDI PAPLVELPPQ AIAAVG
|
| |