Gene Smed_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3375 
Symbol 
ID5324259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3576850 
End bp3577560 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID640792326 
Productendonuclease III 
Protein accessionYP_001329031 
Protein GI150398564 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC GGCAGCGCAG TGCCTACAGC ACCGAGGAAG TGGAGGAGAT CTTTCGCCGC 
TTTTCCGTTC AGCGCCCGGA GCCGAAGGGC GAACTCGAAC ATGTCAATCC GTTCACACTG
GTGGTGGCGG TCGCGCTTTC GGCGCAGGCG ACCGACGCAG GCGTCAACAA GGCGACGCGG
GCGCTCTTCG CCGTCGCGGA TACGCCCGAG AAGATGCTGG CGCTCGGGGA GGAGCGCGTT
CGCGACTATA TCAAGACGAT CGGTCTCTAC CGCAACAAGG CGAAAAACGT CATTGCCCTG
TCCCGCAAGC TGATCACCGA CTTCGGGGGC GAGGTGCCGC GCACGCGCGA AGAGCTCGTG
ACGCTGCCGG GCGTCGGGCG AAAGACAGCG AATGTGGTGC TCTCGATGGC CTTCGGCGAG
GCGACCATCG CGGTCGACAC CCATATCTTC CGTATCGCCC ACCGTATCCG CATTGCACCC
GGCAAGACAC CGGATGAGGT AGAGGCGCAT CTTCTGCGGG TCATCCCCGA ACACCGTCTG
TACCACGCTC ATCATTGGCT GATCCTGCAC GGCCGATACG TGTGCAAGGC GCGCCGGCCG
GAATGCGAGC GCTGCGTCAT TGCCGACATC TGCAAGTCGC CGGAGAAGAC CTCGGATATC
CCGGCGCCGC TCGTCGAATT GCCGCCGCAG GCAATTGCCG CCGTCGGCTG A
 
Protein sequence
MSARQRSAYS TEEVEEIFRR FSVQRPEPKG ELEHVNPFTL VVAVALSAQA TDAGVNKATR 
ALFAVADTPE KMLALGEERV RDYIKTIGLY RNKAKNVIAL SRKLITDFGG EVPRTREELV
TLPGVGRKTA NVVLSMAFGE ATIAVDTHIF RIAHRIRIAP GKTPDEVEAH LLRVIPEHRL
YHAHHWLILH GRYVCKARRP ECERCVIADI CKSPEKTSDI PAPLVELPPQ AIAAVG