| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3351 |
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| Symbol | |
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| ID | 5324235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3549564 |
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| End bp | 3550373 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792302 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001329007 |
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| Protein GI | 150398540 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGG TGCGCATTAT CATTCTGGCC GTGGCGGTCG GCTCGGCTGC CATGGCCGGG
CTGCTGGCGA TGAAGCTTAC CCGCGCGCCC GCCGCCCGAA TGGCGGAACC GGTCATCGAG
CAGGCGCCGA CGATCAACGT GCTCGTTGCC GGCAAGAGCC TGCCCGTCGG CTCCCGTCTC
GGCGCCGATT CCATTCACTG GAAAGCCTGG CCGAAGGACG GCATCGCCGA AGGCATGATT
ACAGAGGAAA CACGTCCCTC TGCCGTCGAC GACCTTGCCG GCGCGGTCGT CCGCCTGCCG
ATCTTCACCG GGGAGCCGGT CCGTCAGGAA AAGATCGCCG ATGCATCGAA CCGGATCATG
TCGTCGCTGT TGCCGGCCGG AAAGCGGGCG GTGGCGACGG AAATCACGGT CGCGACCGGT
GCGGGCGGAT TCATCCTGCC GAACGATCGC GTCGACGTCA TCATGGTGCG CAAGTCCGAC
GGCGATCTCT ATCTGACGGA AACCGTCCTC AGCAATGTGC GCGTGCTCGC GATCGACCAG
CAGATCGAGG AGAAGGAGGA CGGCACAAAG GCCGTCGTCG GCACGACTGC GACGCTGGAA
CTCACGCCGG ATCAGTCGAA AGTCATGACG GTGACGCAGC AGATGGCGGA CCGCATCTCG
CTGGCGCTCC GCAGCGTCGC CGACGCGCAG GAGCCGGACA CCACGGCTGC CGACCACCTT
CTCAACGGCG ACGGCCAACC AAGCATTCAG GTCATCAAGT CGGGCTCCAT CGTCAAGGGC
GACGGTGTGG CTCTCCAGAA TCAGAAGTAG
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| Protein sequence | MKPVRIIILA VAVGSAAMAG LLAMKLTRAP AARMAEPVIE QAPTINVLVA GKSLPVGSRL
GADSIHWKAW PKDGIAEGMI TEETRPSAVD DLAGAVVRLP IFTGEPVRQE KIADASNRIM
SSLLPAGKRA VATEITVATG AGGFILPNDR VDVIMVRKSD GDLYLTETVL SNVRVLAIDQ
QIEEKEDGTK AVVGTTATLE LTPDQSKVMT VTQQMADRIS LALRSVADAQ EPDTTAADHL
LNGDGQPSIQ VIKSGSIVKG DGVALQNQK
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