| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3336 |
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| Symbol | |
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| ID | 5324220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3534676 |
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| End bp | 3536910 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640792287 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001328992 |
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| Protein GI | 150398525 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.812406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCA TATTTCGGGA AACGAGATTC CGGGTCGAGG GAATGGATTG CGCATCCTGC
GCGGCGAAGA TCGACACGGC CGTCAGGCGG GTGTCTGGCG TCGAGGACGT CAACGTGTCG
GTGGCTGCGG GAACGATGAC GGTACGGCAT GCGGCGCGCG ACGATGTCGG TGCGCAGGTG
ATGCGCAAAG TCGGCGGTCT CGGCTACAGG CTGTCGCCGC TTCGCGGCGA GAGGGACCGG
CAGGATGCCG GCGAGGGTGT TTGCTGCGGG CACGACCATT CGGTGAACGA AGCTTCGCAC
CGCCACGATC ATGGCGATGA TAAGGTTCTG CCGGCAGCCG CCAGGACTGC CGGTGCCACA
GCGCCATTGC AGTGGTGGCA GACGGCAAAA GGCAAGCTCA CGCTCGCCTG CGGCCTGAGC
CTCGCTGCGG CCTATGTTAT CGGCACATTC GTTCCTGCCA GCGATCCCTG GATTTTCACG
CTTGCGATGC TTGTCGGCCT GATGCCGATC GCAAGACGGG CATTCATGGC TGCGATCTCC
GGCACTCCTT TCTCGATCGA GATGCTGATG ACCATTGCGG CTGCCGGTGC CGTTTTCATC
GGTGCCGGCG AGGAAGCGGC CATGGTCGTC TTTCTCTTCC TGATAGGTGA ACTGCTCGAG
GGCGTTGCCG CGGGCAAGGC GCGGGCGAGC ATCCAGTCGC TTTCGGCACT GGTGCCGAAA
TCGGCGCTTC TCGAGGAGAA CGGCCGGACG GTTGAGGTTC CCGCAGAGAG CCTGGCGCCT
GGCGCTGTCG TTCTCGTCCG CCCTGGCGAC CGGCTACCCG CCGATGGCGT CATCGTCGCC
GGCGAGAGCA GCGTCGACGA GGCGCCGGTC ACCGGCGAAA GCACGCCTGT CCTCAAGGGA
GCCGGGGCGG ATGTCTTTGC CGGAACGGTC AACGGCGATG GGGCGCTTCG CGTGTGTGTC
ACCGCCGCCG CGGCCGATAA TACCATCGCG CGCGTCATTC GGCTGGTGGA GGAGGCGCAG
GAGAAGAAGG CCCCGACGGA ACGTTTCATC GATCGCTTCT CGCGCTACTA CACGCCTGCC
GTCGTGCTGG TTGCGGCCCT GGTTGCGATC GTGCCGCCGC TCTTCTTCGG CGGTCTGTGG
CAGGAGTGGA TCTATAAGGG CCTCGCGCTT CTCCTGATAG GCTGCCCCTG CGCGCTCGTC
ATTTCGACGC CGGCCGCCAT TGCAGCGAGC CTCTCGGCGG GCGCGCGCCG GGGCCTTCTG
ATCAAGGGCG GCGCGGTCCT CGAAACCCTC GGCGGGATCA CGGCCGTCGC CTTCGACAAG
ACCGGGACAC TTACCGAAGG CAAGCCTAAG CTGACCGACA TCGTCGGTTT CGGCAGATCG
GAGGCAGAGG TCCTCGGCTA TGCCGCTGCG CTCGAACAGG GCTCCAGCCA TCCGCTGGCA
CGAGCCGTCC TTTGGCGGGC TGAGGCCGAT GGATTAACGC CCGCTCCTGT CGAAGATGCC
AGGGCCATCG GGGGCAAGGG CGTTGCCGCG TTCGCAAACG GCGTCGAGCT TTTTCTGGGC
TCGCCCGAGG CGGCCGGGGA GCGGGCGCCA CTGGACGCCG GGGAGAAGGC GGAGATAGAG
GCATTGCAGC GGGCGGGTAA AACTGTCTCC GTTCTGATTG TCGGCGGCAA GGCGGCCGGG
GCGCTTGCCA TGCGCGATGA ACCGCGTGCG GATGCCGCAG CGGGCCTCAG AGCGCTCGCC
GAAGCCGGCC TGCGCGTGGT GATGCTTACC GGCGACAACC GTGCGACCGC CGAGGCGATT
GCAGGGCGTC TCGGCGGCAT AGAGGCGCAT GCCGGGCTTC TTCCCGAGGA CAAACAGCGC
ATCGTCAACA GGCTCAAGAC GGAAGGATTC GTCGTGGCCA AGGTCGGCGA CGGGATCAAC
GATGCGCCGG CGCTCGCTGC AGCGGATGTC GGGATCGCCG TCGGCGGCGG CACCGATGTT
GCGCTCGAAA CGGCCGACGC CGCCAGCCTC CATGCCCGCG TCTCCGACAT TGCGGCAATG
GTGAGGCTTT CGCGGGTGAC GATGCGCAAC ATCCACCAGA ACATCGCGAT CGCACTCGGC
CTGAAGGCCG TGTTCCTGGT CACGACGATC GCGGGCATAA CGGGCCTCTG GCCGGCGATC
CTCGCCGATA CCGGGGCGAC GGTGCTGGTG ACGATGAATG CGCTGAGATT GCTCGCTTCG
CCGGTCAAGC GTTGA
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| Protein sequence | MTGIFRETRF RVEGMDCASC AAKIDTAVRR VSGVEDVNVS VAAGTMTVRH AARDDVGAQV
MRKVGGLGYR LSPLRGERDR QDAGEGVCCG HDHSVNEASH RHDHGDDKVL PAAARTAGAT
APLQWWQTAK GKLTLACGLS LAAAYVIGTF VPASDPWIFT LAMLVGLMPI ARRAFMAAIS
GTPFSIEMLM TIAAAGAVFI GAGEEAAMVV FLFLIGELLE GVAAGKARAS IQSLSALVPK
SALLEENGRT VEVPAESLAP GAVVLVRPGD RLPADGVIVA GESSVDEAPV TGESTPVLKG
AGADVFAGTV NGDGALRVCV TAAAADNTIA RVIRLVEEAQ EKKAPTERFI DRFSRYYTPA
VVLVAALVAI VPPLFFGGLW QEWIYKGLAL LLIGCPCALV ISTPAAIAAS LSAGARRGLL
IKGGAVLETL GGITAVAFDK TGTLTEGKPK LTDIVGFGRS EAEVLGYAAA LEQGSSHPLA
RAVLWRAEAD GLTPAPVEDA RAIGGKGVAA FANGVELFLG SPEAAGERAP LDAGEKAEIE
ALQRAGKTVS VLIVGGKAAG ALAMRDEPRA DAAAGLRALA EAGLRVVMLT GDNRATAEAI
AGRLGGIEAH AGLLPEDKQR IVNRLKTEGF VVAKVGDGIN DAPALAAADV GIAVGGGTDV
ALETADAASL HARVSDIAAM VRLSRVTMRN IHQNIAIALG LKAVFLVTTI AGITGLWPAI
LADTGATVLV TMNALRLLAS PVKR
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