| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3307 |
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| Symbol | |
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| ID | 5324191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3498596 |
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| End bp | 3500617 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792259 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001328964 |
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| Protein GI | 150398497 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.593183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC GTATTGGTGT CGACATTGGC GGCACGTTCA CCGATCTCGT CTATTTCGAC
GAGCGGACCG GCAAAACGGT TGAAGGAAAG GTTCCGACCG TGCCTTCGGC GCCGGAGGAG
GGGGTGGTCA ATGCGATCAC CCAGCACGTC CCGCAGGAGA TTATCGAGGA AGCGCTGTTC
TTTCTGCACG GGACGACCGT AGGCCTCAAC GCTCTTCTCG AGCGGCGCGG CTCCAGGATC
GGCCTGATCA CCACGACGGG TTTCCGCGAC GTGCTGGAAA TCCGCCGAGG CGACCGGGTG
GAAATGTATA ATCTGTTCTG GAAGCAGACG GAGCCGCTGG TGCCACGTCG CCTGCGCCTC
GAAGTCGATG GCCGCATGCT GGGCAATGGC CGCGAGTATC GCCCGCTCGA CGCCGACACC
GTGAAAGCGG CGGCGCAAAA GATGATTGCG GAAAGCGTCG ATGCCATCGC GGTCAGTCTG
ATCAACGCCT ACGCCAATCC CGCCCACGAG CTCGAAGTCG AGCGGCTGTT GCGTGAGGAA
GGCTTTGAAG GCGGTATCTC GCTGTCCCAC AGGATCTCGG GCGAGTATCG CGAGTATGAG
CGCACTTCGA CCACCTGCAT CGATGCTTTC GTGCGTGGCC GGATGTCGAA CTACTTGCGC
CGTCTCGACG GCCGCCTGCG CGAGATGGGC TTTAAGGGCA CATCGCTGAT CACCCGCTCC
GGTTCGGGTT CGATGACCTT CGCCGAGGCC GAGGACCGCC CGTTCGAAAC CATCATGTCG
GGACCGGTCG GCGGCGCGCA AGGGGCGAGC GAACTCGCCA AGATGCTCGG CATCAAGGCC
CTGGTCACCG CCGATGTCGG CGGCACCAGC TTCGACACCG CTCTGGTGAT CGACGGCAAG
CCGCAGATCC TGTTCGAGGG CATGATCGAC AATATGCCGA TCCAGAGTCC CTGGGTCGAT
GTGCGCTCCA TCGGTTCGGG AGGCGGCTCG ATCGCCCATA TCGATCCCGG TGGTCTGATG
CGGGTCGGAC CGCGTTCTGC GCAGGCCGTC CCGGGGCCGG CCTGTTACGG CAAGGGCGGC
ACCGAACCCG CCATGACCGA TGCGGCCGCA TGGCTCGGTA TGCTCGGGCC AGGCGATCTC
GCCTCCGGCA TTCACCTCAA TATTGAAAAA GCGCGTGCAG CGCTTGAGTC GGTCGGCACC
CATATCGGTC AGGACGTCGA GGCGACGGCA GCGGGCGTCA TGCGAATCTC ATCGGCGGCA
ATGGCCAATG CCATGCGCGA AATCTCGCTC GATCAGGGCC TCGATCCACG CACGATCACG
CTTCTTCCCT TCGGCGGCGC CGGCCCGTTG ATGGGGACGT TGCTGGCCGA CGAGCTTGAA
ATGAACCATG TCATCATCCC GCCGCTGGCG GGCAATTTCT CCGCATGGGG CCTGTTGGGC
GCCGACATGG TGCAATCGAC GGCGCGCACG CGGGTTATCG GCTTTGCTCC CGGCGCCCTG
ACCGAGGTCG CCCGAATTCT GGAAGAGCTG TTCGCAACAT TGACGGAACG CAGCACGGCG
CATGCCGGCG ACGGCGTGCG CTCCGTACGT CTCGACCTGC GCTACAAGGG TCAGGAGCAT
ACTCTGTCCA TCGAAGTCGA ACTGGCCGAA GGACGTATTG CCGAAACCGA GGAGGCTATC
CTCGAGCGTT TCGTGGCCGA GTATGCCCGC ACGTTCGGCT CGACGATGAA CGAGGATGTC
GAACTGGTCT CGGTCCGTGC CAGCACCACG GTGCTCTTGC CGCGCCGGGA GCTGAGCTAC
ACGTCCAAGC GCTCGGATGG CGAAGATGAT AGGGTTATGG AGGTCTATTC CTTCGAATCC
AGGGCGCGAC TGCCCTTCCG GATCATCCCC CGTGGCCGGA TTTCCGGCGA GATCCGCGGC
CCCGCCATCA TCACCGAAGA CACGACGACC ACCTATGTCG ATGTCCAGTG GACCATCTCG
AGCGGCAAAG CCGGCGAAAT CATTTTGGAA CGGACGCACT GA
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| Protein sequence | MATRIGVDIG GTFTDLVYFD ERTGKTVEGK VPTVPSAPEE GVVNAITQHV PQEIIEEALF
FLHGTTVGLN ALLERRGSRI GLITTTGFRD VLEIRRGDRV EMYNLFWKQT EPLVPRRLRL
EVDGRMLGNG REYRPLDADT VKAAAQKMIA ESVDAIAVSL INAYANPAHE LEVERLLREE
GFEGGISLSH RISGEYREYE RTSTTCIDAF VRGRMSNYLR RLDGRLREMG FKGTSLITRS
GSGSMTFAEA EDRPFETIMS GPVGGAQGAS ELAKMLGIKA LVTADVGGTS FDTALVIDGK
PQILFEGMID NMPIQSPWVD VRSIGSGGGS IAHIDPGGLM RVGPRSAQAV PGPACYGKGG
TEPAMTDAAA WLGMLGPGDL ASGIHLNIEK ARAALESVGT HIGQDVEATA AGVMRISSAA
MANAMREISL DQGLDPRTIT LLPFGGAGPL MGTLLADELE MNHVIIPPLA GNFSAWGLLG
ADMVQSTART RVIGFAPGAL TEVARILEEL FATLTERSTA HAGDGVRSVR LDLRYKGQEH
TLSIEVELAE GRIAETEEAI LERFVAEYAR TFGSTMNEDV ELVSVRASTT VLLPRRELSY
TSKRSDGEDD RVMEVYSFES RARLPFRIIP RGRISGEIRG PAIITEDTTT TYVDVQWTIS
SGKAGEIILE RTH
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