| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3303 |
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| Symbol | |
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| ID | 5324187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3493831 |
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| End bp | 3494859 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792255 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001328960 |
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| Protein GI | 150398493 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAC CTCCTATGTC CATCCCGCTT TTGGAAGTGA CCGGTCTCAA AACCTCATTC
ACGACCCCGC GCGGAACAGT AAAAAGCGTC GATGACGTTT CCTTTTCGAT TGCCGCCGGC
AAAACGCTCG GCGTGGTCGG GGAATCCGGC TCGGGCAAAA GCGTCACATC GCTCTCCATC
ATGCGGCTGG TCGGCCGTGG TGGCGGGGTG ATCGATGATG GTGCGATCCG CCTTAACCTG
CCGGGACAGC CCGGTCTGGA TATCCGCGCG CTGGACGAAA AGGCGATGCG CAAGGTGCGC
GGCAACGATA TCGCCATGAT CTTCCAAGAA CCGATGACCA GCCTCGATCC GGTCTGGTCG
ATCGGCGACC AGACCATAGA GGCCATCCGC CTGCATCAGG ATGTCAGCAA AAATGAAGCT
CGCGAAAAAG CGATCGAAAT GCTCAGGCTC GTCGGAATTT CGGCCCCGGA ATCGCGCGTC
GATGATTTTC CCCACCAGCT CTCAGGCGGC ATGCGCCAGC GGGTGATGAT CGCCATCGCA
CTGTCCTGCC GCCCGGCATT GCTGATCGCC GACGAGCCGA CCACCGCGCT CGACGTCACC
ATTCAGGCCC AGATCCTCGA CCTTATTCGC CGGCTGCAAA AGGAAATCGG CATGTCTGTG
CTGTTCATCA CTCATAATCT CGGTGTCGTC GCCGAGATCG CCGACAAGGT GGCGGTGATG
TATGCCGGCC AGGTGGTTGA GGAAGGCCCC GTCCGGACGA TTTTTTCCGC ACCCCGCCAC
CCTTATACGG TCGGCCTGCT CAAATCGATC CCGATGCCGG GCGGAATGCG CGTGGACGAC
GCCGGCTCGC GCCGGCTCGA CACGATCGGC GGCATGCCTC CCAATCCGCT GGCTTTGCCG
GCCGGATGCC GGTTCGCGCC GCGCTGCTCG CTGGCAATCG AGGACTGTCA TAAGGCACCG
CCGCCTCTGG TGCAGGCCGG CGACGAGCAT GGTGTCCGCT GCATTCGCTG GCAGGAGGTA
AGTAAATGA
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| Protein sequence | MTEPPMSIPL LEVTGLKTSF TTPRGTVKSV DDVSFSIAAG KTLGVVGESG SGKSVTSLSI
MRLVGRGGGV IDDGAIRLNL PGQPGLDIRA LDEKAMRKVR GNDIAMIFQE PMTSLDPVWS
IGDQTIEAIR LHQDVSKNEA REKAIEMLRL VGISAPESRV DDFPHQLSGG MRQRVMIAIA
LSCRPALLIA DEPTTALDVT IQAQILDLIR RLQKEIGMSV LFITHNLGVV AEIADKVAVM
YAGQVVEEGP VRTIFSAPRH PYTVGLLKSI PMPGGMRVDD AGSRRLDTIG GMPPNPLALP
AGCRFAPRCS LAIEDCHKAP PPLVQAGDEH GVRCIRWQEV SK
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