| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3269 |
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| Symbol | |
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| ID | 5324148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3448396 |
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| End bp | 3450399 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640792217 |
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| Product | hydantoinase/oxoprolinase |
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| Protein accession | YP_001328928 |
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| Protein GI | 150398461 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.471232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCCGC ATCTTCTCCT GGGCATCGAC ACCGGCGGCA CCTATACCGA CGCCGTTCTT
TTCAGCGAAA CGAAGGGCGT CGTCGCCAAG GCCAAAGCGC TCACGACCCG TCACGATCTC
GCCGAGGGCG TTTCCGGTGC GGTGGAGGCA GTGCTCGCAA AGGCGGACGT GCCGGTATCG
GCGATCAGCC TCGTATCGCT GTCGACGACG CTTGCCACCA ATGCGCTGGT CGAAGGCCAG
GGCGGCAGGG CCGGCCTGAT CATGATCGGT TTCGCTCCGG ACGACCTGAA GCGCGACGGT
CTTCAGGACG CGCTCGGATC CGATCCTGTC CTCTTCCTTC CCGGCGGCCA CAATGTCCAT
GGCGGCGAGA CGACGCTGGA CATGCGTGCG CTCGACGAGG CGCTGCCGGC GCTCGGGTCC
CAGGTGTCGT CCTTCGCCGT TGCCGGCTAT TTCGCGGTGC GCAACCCGGA TCACGAGAAG
CGTGTTCGCG ATCGCATCCG CGAGGTCTCG CACCTGCCGG TAACCTGCAG CCATGAGCTT
TCCTCCAAGC TTGGCGGACC CCGTCGCGCG CTGACGACGC TTCTGAATGC GCGGCTGGTC
TCGATGATCG ACCGGCTGAT CGTCTCCTGC GAAGACTTCC TCAAGGCCCG CGGCATCGAC
GTGCCGATGA TGGTGGTACG AGGCGACGGT GCGTTGATAT CGGCCGCCGA GGCGCGGCTG
CGGCCGATCG AAACGATTTT GTCGGGTCCG GCTGCGAGCC TCGTCGGCGC TCGCTATCTG
ACCGGCTTTG ACAGCGCCGT GGTCTCCGAT ATCGGCGGCA CGACCACCGA CGTCGCCGTC
CTCGAAAAAG GCCGGCCGCG CCTCGACGCC GACGGAGCTG TCGTCGGCGG CTTTCGCACC
ATGGTCGAGG CGGTCGCCAT GCGCACATAC GGCCTTGGCG GCGACTCGGA GGTGAAGATC
AACGATCGTG GCCTCAAGGC CAGGCTTGAT CTCGGGCCCC GCCGTTTCCT GCCCCTGAGC
CTTGCGGCGG CGCTGCACGG CGACGCGGTT CTTTCGGTGC TCCAAAAGCA GTTGCGGGCG
CCCCATGCCG GCCGGCATGA CGGTCGCCTG GCAGTCCGCA CCGGTTTGCC CGACCATCTC
GCCAGCGGGC TTCAGCCTCA GGAACAGGCC CTTTATGATC GCATAGGAAT GATACCGGTG
GCGCTTGCTG ATCTTCTCGT CACCACGCCG CAGAGGGCGA CCCTCGACAG GCTTGTAGCT
CGCGGTCTGG TGCATCTCTG CGGGCTCACT CCTTCGGACG CGATGCATGT TCTCGGTCGG
CAGGCGCAAT GGAACGGCGA GGCCGCGCGC CTCGGCCTCG AGATTGCCGC TCGAACGAAG
GACGGATCCG GCCAGCCTAT CGCGGCTTCT GTCGCGGCTC TGGCGCAGAT GATCGTGGAC
CGGCTGACGC GGCAGTCGTC GGAGGCCATC CTGCAGGCGT GCCTCAACGA GGACGGCGCC
GGAGCGATCG ATCCTGCCGT CTCGCTTTCC GTTGACCGTG CGCTGAAACG GGAGCCCGGA
ATCGTGCGTT TTTCGCTCGG TATCGACCGG CCGCTTGTCG GGCTCGGCGC CTCCGCACCG
GTCTATTATC CCGCGATCGC TGAAATGCTT TCCGCCGAAC CGGCAATTCC GGCTGAAGCG
GACGTGGCAA ACGCCGTCGG CGCGGTTGTC GGCCAAGTGC GTACGACGGT CACCGTTTTC
GTGACGACGC CGGAAGAAGG CATTTTCATC GTCAACGGTG CCGGCGCGAG CGAGCGTTTC
GTCGATCAAC AGGAGGCCTT CGGCGTTGCC CGCCGCCGCG CGAAAACGAT GGCGCTCGAG
AGCGCCCGCG CGAACGGTGC AGAGGACCCC GCCGCGACCC TTCGGGAAGA GATCGACGCG
CCGGAAGTCG AGGGCAGCCG CAAGCTGATC GAGGCGCGCT TCATCGCCTC GGCAAGCGGC
CGGCCGCGAA TCGCACATGG CTGA
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| Protein sequence | MTPHLLLGID TGGTYTDAVL FSETKGVVAK AKALTTRHDL AEGVSGAVEA VLAKADVPVS
AISLVSLSTT LATNALVEGQ GGRAGLIMIG FAPDDLKRDG LQDALGSDPV LFLPGGHNVH
GGETTLDMRA LDEALPALGS QVSSFAVAGY FAVRNPDHEK RVRDRIREVS HLPVTCSHEL
SSKLGGPRRA LTTLLNARLV SMIDRLIVSC EDFLKARGID VPMMVVRGDG ALISAAEARL
RPIETILSGP AASLVGARYL TGFDSAVVSD IGGTTTDVAV LEKGRPRLDA DGAVVGGFRT
MVEAVAMRTY GLGGDSEVKI NDRGLKARLD LGPRRFLPLS LAAALHGDAV LSVLQKQLRA
PHAGRHDGRL AVRTGLPDHL ASGLQPQEQA LYDRIGMIPV ALADLLVTTP QRATLDRLVA
RGLVHLCGLT PSDAMHVLGR QAQWNGEAAR LGLEIAARTK DGSGQPIAAS VAALAQMIVD
RLTRQSSEAI LQACLNEDGA GAIDPAVSLS VDRALKREPG IVRFSLGIDR PLVGLGASAP
VYYPAIAEML SAEPAIPAEA DVANAVGAVV GQVRTTVTVF VTTPEEGIFI VNGAGASERF
VDQQEAFGVA RRRAKTMALE SARANGAEDP AATLREEIDA PEVEGSRKLI EARFIASASG
RPRIAHG
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