Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3255 |
Symbol | |
ID | 5324134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3436779 |
End bp | 3437252 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640792203 |
Product | LysM domain/BON superfamily protein |
Protein accession | YP_001328914 |
Protein GI | 150398447 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTGT TCAGTTTCAT CAAGAATGCG GGAAAGAAGC TCGGGCTTGG CGGAGACGAT ACGCCGCCGG ACGCGGCGAG CGTCGAAAAG GAGCTTGCTT CCCATGATCT CGGCACCAAT GACGTCAAGA TCGACGTCGT GGATGACAAA GTGGTGCTGA AGGGTGTCGT CAAGGACCAG TCGACCTTCG AGAAAGCGGT CGTGGCCGTC GGCAACACGC TCGGCATATC GAAGGTCGAG GCGTCCGAGC TCAAGGTGGC CGATGGCGCC GCTGCTCCGG CAGAGGCGAA GGCGCCGGTA TTCTACACCG TGAAGAAGGG CGACAATCTC TGGAAGATCG CCGAGGCGCA TTACGGCAAG GGCAAGGGTG CCAAGCACAC CGCGATCTTC GAGGCCAACA AGCCCATGCT CACCCATCCC GACAAGATCT ATCCGGGTCA GGTTCTGCGC ATCCCGGACC TGGATGCGAG CTGA
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Protein sequence | MGLFSFIKNA GKKLGLGGDD TPPDAASVEK ELASHDLGTN DVKIDVVDDK VVLKGVVKDQ STFEKAVVAV GNTLGISKVE ASELKVADGA AAPAEAKAPV FYTVKKGDNL WKIAEAHYGK GKGAKHTAIF EANKPMLTHP DKIYPGQVLR IPDLDAS
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