Gene Smed_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3255 
Symbol 
ID5324134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3436779 
End bp3437252 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID640792203 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_001328914 
Protein GI150398447 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGT TCAGTTTCAT CAAGAATGCG GGAAAGAAGC TCGGGCTTGG CGGAGACGAT 
ACGCCGCCGG ACGCGGCGAG CGTCGAAAAG GAGCTTGCTT CCCATGATCT CGGCACCAAT
GACGTCAAGA TCGACGTCGT GGATGACAAA GTGGTGCTGA AGGGTGTCGT CAAGGACCAG
TCGACCTTCG AGAAAGCGGT CGTGGCCGTC GGCAACACGC TCGGCATATC GAAGGTCGAG
GCGTCCGAGC TCAAGGTGGC CGATGGCGCC GCTGCTCCGG CAGAGGCGAA GGCGCCGGTA
TTCTACACCG TGAAGAAGGG CGACAATCTC TGGAAGATCG CCGAGGCGCA TTACGGCAAG
GGCAAGGGTG CCAAGCACAC CGCGATCTTC GAGGCCAACA AGCCCATGCT CACCCATCCC
GACAAGATCT ATCCGGGTCA GGTTCTGCGC ATCCCGGACC TGGATGCGAG CTGA
 
Protein sequence
MGLFSFIKNA GKKLGLGGDD TPPDAASVEK ELASHDLGTN DVKIDVVDDK VVLKGVVKDQ 
STFEKAVVAV GNTLGISKVE ASELKVADGA AAPAEAKAPV FYTVKKGDNL WKIAEAHYGK
GKGAKHTAIF EANKPMLTHP DKIYPGQVLR IPDLDAS