Gene Smed_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3247 
Symbol 
ID5324126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3428654 
End bp3430054 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content61% 
IMG OID640792195 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_001328906 
Protein GI150398439 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA ATCAGGACTA TATCGTCGCC GACATCGGAC TTGCCGATTT CGGCCGCAAG 
GAAATTGCCA TCGCAGAAAC GGAAATGCCT GGTCTGATGG CCTGCCGTGA GGAGTTCGGT
GCATCGAAGC CGCTGAAGGG CGCACGCATC ACCGGCTCGC TCCACATGAC GATCCAGACC
GCGGTGCTGA TCGAGACGCT GGTCGCTCTC GGTGCCGAAG TGCGTTGGGC GTCGTGCAAC
ATCTTCTCGA CACAGGACCA CGCCGCAGCC GCGATCGCCG CGAGCGGCGT TCCCGTTTTC
GCCGTCAAGG GTGAGACGCT CGAGGAATAC TGGACCTATA CCGACAAGAT CTTCCAGTGG
GCCGATGGCG GCGTCTCGAA CATGATCCTC GACGACGGCG GCGACGCGAC CATGTATATC
CTGCTCGGCG CCCGCGCCGA GGCAGGCGAG AACATTCTGA TCAATCCGGG CTCCGAAGAG
GAAGAGATCC TTTTCGCACA GATCAAGAAG CGCCTCGCCG CGACGCCCGG CTGGTTCACC
AAGCAGCGCG ACGCGATCAA AGGCGTGACG GAAGAGACGA CGACCGGCGT CAACCGCCTG
TACCAGCTCC AGGCCAAGGG CCTGCTGCCC TTCCCGGCGA TCAACGTCAA CGACAGCGTC
ACCAAGTCCA AGTTCGACAA CAAATACGGC TGTAAGGAAT CGCTCGTCGA CGGCATCCGC
CGCGGTACCG ACGTGATGAT GGCCGGCAAG GTCGCGGTGG TCTGCGGCTA CGGCGACGTC
GGCAAGGGCT CGGCCGCTTC GCTCAGCGGC GCCGGCGCAC GCGTCAAGGT CACTGAAGTG
GACCCGATCT GCGCCCTCCA GGCGGCCATG GACGGCTACG AAGTCGTTCA GCTCGAAGAC
GTCGTATCAT CAGCGGACAT CTTCATCACC ACGACCGGCA ACAAGGACGT CATCCGCATC
GAGCACATGC GCGCGATGAA GGACATGGCG ATCGTCGGCA ATATCGGTCA CTTCGACAAC
GAGATCCAGG TATCGGCGCT CCGTAACCTG AAGTGGACAA ACGTCAAGCC GCAGGTCGAT
CTCATCGAGT TCCCGAAGGG CAATCGCATC ATCCTGCTTT CGGAAGGCCG TCTGCTCAAC
CTCGGCAACG CCACCGGACA TCCGTCCTTC GTCATGTCGG CTTCCTTCTC CAACCAGGTT
CTGGCGCAGA TCGAGCTCTT CACGAAGGGC GAGAACTACA AGAACGAGGT TTACGTGCTG
CCGAAGCAGC TCGACGAGAA GGTGGCGCGA CTGCATCTCG CCAAACTCGG CGCGAAGCTG
ACCGAGCTTT CGGAGGAACA GGCCGCCTAT ATCGGCGTGA AGGCGCAGGG TCCGTTCAAG
GCCGAACACT ACCGGTACTA A
 
Protein sequence
MSANQDYIVA DIGLADFGRK EIAIAETEMP GLMACREEFG ASKPLKGARI TGSLHMTIQT 
AVLIETLVAL GAEVRWASCN IFSTQDHAAA AIAASGVPVF AVKGETLEEY WTYTDKIFQW
ADGGVSNMIL DDGGDATMYI LLGARAEAGE NILINPGSEE EEILFAQIKK RLAATPGWFT
KQRDAIKGVT EETTTGVNRL YQLQAKGLLP FPAINVNDSV TKSKFDNKYG CKESLVDGIR
RGTDVMMAGK VAVVCGYGDV GKGSAASLSG AGARVKVTEV DPICALQAAM DGYEVVQLED
VVSSADIFIT TTGNKDVIRI EHMRAMKDMA IVGNIGHFDN EIQVSALRNL KWTNVKPQVD
LIEFPKGNRI ILLSEGRLLN LGNATGHPSF VMSASFSNQV LAQIELFTKG ENYKNEVYVL
PKQLDEKVAR LHLAKLGAKL TELSEEQAAY IGVKAQGPFK AEHYRY