| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3246 |
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| Symbol | |
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| ID | 5324125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3425870 |
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| End bp | 3428350 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792194 |
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| Product | histidine kinase |
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| Protein accession | YP_001328905 |
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| Protein GI | 150398438 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACAC ATCTATCCAG GACTTCTGCA AAACGGCAGG GGGCGCCGAG ACTCATAAGG
CGGCTCCTTG CGGGGACGGT ACTGCTCACG GCAAGCGATG CCGCTGCTCA GGCCGCCGGC
CCGGCCAGAA GCATATTCGG CACCCCCGAG GTCGTCACCT TCTCCGTGCT TATCGGGGTC
ATTTCCGCCG CCATGATTTC GGCGATCTGG CTCATCCGCC AGCGCGGAAA CATAGAGGCC
GAGAACCGCG ATCTTCGCTC CAGCCTGTCC GACGCGAACC AGCATATTTC CCGCTTTCAG
GCGCTAATCG CCGACAAGAA CAGGCGTATC GTGATCTGGG ACGGGCTCGC AGATCGAGCC
GAGTTCCTGG GGCATCTCCC GGTGGAGACC GGCGCACCAC AGGACGACCG CGACTTTCTC
GCCTTCGGCC GCTGGGTCAA GCCGCATTCG GCGGGGCAGC TCGAAAAAGC GATCGAGGCT
CTGCGCGCCC AGGCGCAAAG CTTCGACCTC GTGCTCGAGA CCCAGCGCAA CGAGGTCCTC
GAGGCTCAGG GCCGCGTGTC GGGCGGGCGG GCCTTCGTTC GCTTCATCGC GCTCAACAAT
CTCAGGGCAG AGCTCGCCGA ACTGAAGCTC GAACGCGACC AGCTGCACGC GTCCCTTTCA
ACATTCCGGA CGCTGCTCGA CGCGGTCGAC CTTCCCGCCT GGCAGCGCGC AGGAGACGGC
AGGCTCGAAT GGGTCAACGC CGCCTATGCC AAGGCGGTGG AAACCCCGAG TGCGAGCCTT
GCGGTCGCCG AAGAGAGGGA GCTGCTCGCG ACGGCGGCTC GCGACCGGAT CAGGGCGGTC
GCGACCCTGC AGACGCCGTT CCGCGACAAG GTTTCCACAG TTGTGAGGGG CAACAGGACG
TTCTTCGACG TCGTGGACGC CCGCACGCCG GCCGGCTCGG CTGGCATCGC GATCGACGTC
TCCGGTATCG AAGCGGTGCG CGAGGAACTG GCCAGGACGC TCAAGAGCCA TGCCGAAACG
CTCGAGCACC TGGCAACGCC GGTGGCGATC TTCGACGGCA ACCAGCGCCT GCAGTTCTAC
AATCAGGCAT TCCAGCGGCT TTGGGATCTG GATATGGGAT TCCTCGAGCG TAAGCCGGAC
AATGGCGAGA TGTTCGACCG CCTGCGCGAC GGCGGCAAGC TGCCGGAGCA GCTCAATTGG
AAACAATGGA AGGCGAATGC GCTTTCCGTC TATCAGGCGC TCGACACCCA GACCGATCTC
TGGCACCTGC CGAACGGCCA GACGCTGCGC GTTTTCGCGA CCGCACGGCC GCAGGGCGGC
GCCACCTGGG TCTTCGAGAA CCTGACGGAG AAGGTCGACC TCGAAACGCG GTATAACACG
CTGGTCCAGG TCCAGGGCGA AACGATCGAT CATCTCGCCG AGGGCGTCGC CGTTTTCGGA
CCGGACGGCC GCATACGGTT GTCGAACCCG GCCTTCCGGG CGATCTGGGG CATCAACGAG
ACCGAGGCCC AGCCCGGCAC CCATATACGA GCGATCGAGC AGGCGTGCCT TGCTTCCTAT
GACCAGCAGG ACGGCTGGAA GCGCTTCGCC CATATCATCA CCAGCTTCGA TGATGAGCGG
CCGTCGAGCC GCGGGATCCT GGAACTGCGC ACCGGGCTGA TCCTTGATTA CGCGGTCATT
CCGCTTCCGA ACGCCCAGAC GATGCTGACC TTCGTCAATA TCACCGACAG CGTCCGCGTC
GAGCGTGCGC TGACCGAGAA GAACGAAGCG CTGCGCAAGG CGGACGCGCT GAAGAACGAT
TTCGTGCACC ATGTTTCCTA CGAGCTGCGC TCGCCGCTGA CGAACATCAT CGGTTTCGCC
GACCTTCTGA AAACGCCGGT CTTCGGCGAA CTCAACGAGC GCCAGGCGGA ATATGTCGAT
CACATCGCCA CCTCTTCGTC GCTGCTTCTG ACGATCGTCA ACGACATTCT CGATCTCGCG
ACCGTCGATG CCGGTATCGT CGAGCTCGAG CTGGCCGAGG TGAACCTCAT CGACCTCATC
GACGACGTGA CCCAGCAGAT GGGCGATCGC CTGGTGGAGA GCGGCGTGTC GCTTCGAACC
GATGCACCCG ACAATCTCGG CCGAATCACC GCCGATCAGC AACGGCTAAA GCAGATTTTC
ATAAAGCTAC TGACCAATGC CGCGAATTTC GCGCCCGACG GGAGCACGAT CGAGCTCAAA
TGCTGGCGCG AGGGGAGCGA CTTTGCCTTT TCCGTCACCG ACACCGGGCC GGGCATCCCG
CAGGACGTGC TCAACACCGT CTTCAACCGC TTCGAAAGCT ACGGCCAACG CGGCGGCGCC
GGTCTGGGCC TCTCCATCGT CGAGAGCTTC GTCAGCCTTC ACCACGGCAA CGTGTCGATC
CGCAGCAAGG AGGGTGAGGG CACCGAAGTC ACCTGCCGCA TTCCCTCCGC TCAAGCGCCG
AAGGTCATTG CGGCGGAATA G
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| Protein sequence | MKTHLSRTSA KRQGAPRLIR RLLAGTVLLT ASDAAAQAAG PARSIFGTPE VVTFSVLIGV
ISAAMISAIW LIRQRGNIEA ENRDLRSSLS DANQHISRFQ ALIADKNRRI VIWDGLADRA
EFLGHLPVET GAPQDDRDFL AFGRWVKPHS AGQLEKAIEA LRAQAQSFDL VLETQRNEVL
EAQGRVSGGR AFVRFIALNN LRAELAELKL ERDQLHASLS TFRTLLDAVD LPAWQRAGDG
RLEWVNAAYA KAVETPSASL AVAEERELLA TAARDRIRAV ATLQTPFRDK VSTVVRGNRT
FFDVVDARTP AGSAGIAIDV SGIEAVREEL ARTLKSHAET LEHLATPVAI FDGNQRLQFY
NQAFQRLWDL DMGFLERKPD NGEMFDRLRD GGKLPEQLNW KQWKANALSV YQALDTQTDL
WHLPNGQTLR VFATARPQGG ATWVFENLTE KVDLETRYNT LVQVQGETID HLAEGVAVFG
PDGRIRLSNP AFRAIWGINE TEAQPGTHIR AIEQACLASY DQQDGWKRFA HIITSFDDER
PSSRGILELR TGLILDYAVI PLPNAQTMLT FVNITDSVRV ERALTEKNEA LRKADALKND
FVHHVSYELR SPLTNIIGFA DLLKTPVFGE LNERQAEYVD HIATSSSLLL TIVNDILDLA
TVDAGIVELE LAEVNLIDLI DDVTQQMGDR LVESGVSLRT DAPDNLGRIT ADQQRLKQIF
IKLLTNAANF APDGSTIELK CWREGSDFAF SVTDTGPGIP QDVLNTVFNR FESYGQRGGA
GLGLSIVESF VSLHHGNVSI RSKEGEGTEV TCRIPSAQAP KVIAAE
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