| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3240 |
|---|
| Symbol | |
|---|
| ID | 5324119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3414978 |
|---|
| End bp | 3416321 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640792188 |
|---|
| Product | FolC bifunctional protein |
|---|
| Protein accession | YP_001328899 |
|---|
| Protein GI | 150398432 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0285] Folylpolyglutamate synthase |
|---|
| TIGRFAM ID | [TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA CTGAGGTCAG CGAGGCGGCG CGGGAGATCG AGAAGCTTCT CGCCCTCCAC
CCGAAAGGAT TCGACCTCTC GCTCGACAGG ATCACGCGGC TGCTCGCCGC TCTCGGCAAT
CCACAAGAGC GCCTGCCCCC GGTCATTCAC GTCGCGGGGA CGAACGGCAA GGGCTCGGTC
ACGGCCTTCT GCCGTTCGAT TCTGGAGGCT GCGGGCCTGA GCGTCCACGT TCACACATCG
CCGCATCTGG TGAACTGGCA CGAGCGCTAC CGCCTGGGCG TCAAGGACGG CAAGGGCGCT
TTGGTCAGCG ACCCTGTGCT CGCAGACGCC GTGCGGCGCG TCGCAGAAGC GAATGGCGGC
CAGAAGATTA CCGTCTTTGA AATCCTGACC GCCGTCACTT TCCTTCTTTT CGCGGAGCAT
CCGGCCGATG TCGCGATCAT AGAAGTCGGT CTCGGCGGCC GATATGACGC GACCAATGTC
ATCGCTCGGC CGGCGGTCTC GGTGATCATG CCCATTTCGC TCGACCATCA GGCATATCTC
GGCGATCGAG TCGAACTGAT CGCTGCGGAA AAGGCCGGGA TCATGAAGCG CGGCTGCCCG
GTGGTGATCG GCCATCAGGA GGAAGAAAGC GCACGCGAGG TGCTGATCGA GACAGCCGAA
CGCCTTGGCT GCCCCACATC CGTGTACGGG CAGGATTTCA TGGCGCATGA GGAGTTTGGC
AGGCTGATCT TCCAGGACGA GAACGGCCTG GCCGATTTGC CGTTGCCCCG CCTGCCGGGC
AGGCATCAAT ATGCCAATGC CGCTGCTGCC ATCCGCGCCG TACGGGCAGC CGGCTTCGAT
GTTCCGGAGC CAGCGATCGA GAAGGGACTG GCCGGCGTCG AGTGGCCAGG GCGGCTGCAG
CGTCTCGCGG GCGGCAGGCT TTCGCATTTC GGCCCGCCGG GCGCCGAGAT CTGGATCGAC
GGCGGGCATA ATCCCGGTGC CGGCCATGTC ATCGCCGAGG CGATGGCCAC CTTCGAGGAG
CGTGACCCGA GGCCGCTCTT TCTGATCATC GGGATGATCA ACACCAAGGA TCCGATCGGT
TATTTCAAGG CTTTTCTCGA CCTGACCGAA CAGGTCTTCA CCGTGCCTGT TCACGGTTCC
GATGCAGGGC TGGACCCTCT GGCGCTCGCT GCGGACGCGG CCGCTGCCGG GCTCGAGGCC
AATGCCGCTT CCTCGGTCGC CGAAGCGCTG GGCCAGATCG CCGAGCTCAC GGACGAGGAC
CCGGTGCCAC CGCGTGTGCT GATCGGCGGA TCGCTCTATC TGGTGGGCGA CGTGCTGGCG
GAGAACGGTA CGCCGCCGCG ATAG
|
|---|
| Protein sequence | MTATEVSEAA REIEKLLALH PKGFDLSLDR ITRLLAALGN PQERLPPVIH VAGTNGKGSV
TAFCRSILEA AGLSVHVHTS PHLVNWHERY RLGVKDGKGA LVSDPVLADA VRRVAEANGG
QKITVFEILT AVTFLLFAEH PADVAIIEVG LGGRYDATNV IARPAVSVIM PISLDHQAYL
GDRVELIAAE KAGIMKRGCP VVIGHQEEES AREVLIETAE RLGCPTSVYG QDFMAHEEFG
RLIFQDENGL ADLPLPRLPG RHQYANAAAA IRAVRAAGFD VPEPAIEKGL AGVEWPGRLQ
RLAGGRLSHF GPPGAEIWID GGHNPGAGHV IAEAMATFEE RDPRPLFLII GMINTKDPIG
YFKAFLDLTE QVFTVPVHGS DAGLDPLALA ADAAAAGLEA NAASSVAEAL GQIAELTDED
PVPPRVLIGG SLYLVGDVLA ENGTPPR
|
|---|
| |