Gene Smed_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3239 
Symbol 
ID5324118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3413929 
End bp3414843 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content61% 
IMG OID640792187 
Productacetyl-CoA carboxylase subunit beta 
Protein accessionYP_001328898 
Protein GI150398431 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTGGA TCACAAACTA CGTTCGGCCG AAGATCAATT CGATGCTCGG TCGCAGGGAA 
GTTCCGGAGA ACCTCTGGAT CAAGTGCCCT GAAACGGGCG AGATGGTGTT CCATCGCGAT
CTCGAAGAGA ACAAATGGGT CATCCCGCAA TCCGGTTTTC ATATGAAGAT GCCGGCGAAG
GCCCGCCTTA AGGATCTCTT CGACGGCGGT ATTTACGAGG CGTTTCCGCA GCCGAAGGTG
GCGCAGGACC CGCTCAAGTT CCGCGATTCA AAGAAATACT CCGATCGCCT GCGCGACAGC
CGTACCAAGA CCGAGCTCGA GGACACGATC GTTGCCGGCC TCGGCCAGGT GCAGGGGATC
AAGCTCGTCG CGGTCGCTCA TGAGTTCAAC TTCATAGGCG GATCACTCGG CATTGCCGCG
GGCGAAGCGA TCGTGAAGGC TTTCGAGCGG GCAATTGCCG AGAAGTGCCC GCTGGTCATG
TTCCCGGCTT CTGGCGGCGC TCGCATGCAG GAAGGCATCC TGTCGCTGAT GCAGCTGCCG
CGCACGACCG TCGCGGTGAA CATGCTCAAG GAGGCGGGTC TTCCCTATAT CGTCGTCCTG
ACGAATCCGA CCACCGGTGG CGTCACGGCG TCCTATGCGA TGCTGGGTGA TGTCCACCTG
GCTGAGCCTG GCGCGGAGAT CGGCTTCGCC GGAAAGCGGG TGATCGAGCA GACGCTGCGG
GAAAAGCTCC CCGAGGGCTT CCAGACTTCC GAGTATCTGA TGGAGCACGG CATGGTCGAC
ATGGTCGTCA AACGCCACGA TATCCCGGAG ACGCTCGCCC GCGTGCTCAA CATTCTCATG
AAAAAGCCGG CCAAGGCGAT CAAACGGGAT ACCGCTACCG AGCTTGCGCC GCTGCCCGTG
GCCGCGAGCG CCTAG
 
Protein sequence
MNWITNYVRP KINSMLGRRE VPENLWIKCP ETGEMVFHRD LEENKWVIPQ SGFHMKMPAK 
ARLKDLFDGG IYEAFPQPKV AQDPLKFRDS KKYSDRLRDS RTKTELEDTI VAGLGQVQGI
KLVAVAHEFN FIGGSLGIAA GEAIVKAFER AIAEKCPLVM FPASGGARMQ EGILSLMQLP
RTTVAVNMLK EAGLPYIVVL TNPTTGGVTA SYAMLGDVHL AEPGAEIGFA GKRVIEQTLR
EKLPEGFQTS EYLMEHGMVD MVVKRHDIPE TLARVLNILM KKPAKAIKRD TATELAPLPV
AASA