| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3237 |
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| Symbol | |
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| ID | 5324116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3411810 |
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| End bp | 3413030 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792185 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001328896 |
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| Protein GI | 150398429 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCAGC CGCCTAAACC GAATTCCTTC AGATCCGGAC CCGATGAAGA GGGCCGTTTC
GGCATATTCG GTGGCCGCTT CGTCGCCGAG ACGCTGATGC CGCTGATCCT CGACCTCCAG
GACGAATGGG CGAGGGCAAA GAATGATCCG GCTTTCAAGG CGGAGCTGGA AAATCTCGGC
AGGCATTATA TCGGCCGGCC GAGCCCGCTC TATTTCGCCG AGCGCCTGAC GGCCGAACTC
GGCGGCGCGA AGATCTACTT CAAGCGCGAG GAGCTCAATC ACACGGGCTC CCATAAGATC
AATAACTGCA TCGGCCAGAT CCTGCTTGCC AAGCGCATGG GCAAGACCCG CATCATCGCC
GAGACCGGCG CCGGCCAGCA TGGTGTGGCA TCGGCCACCG TGGCGGCGCG TTTCGGGCTG
CCTTGCGTCG TCTATATGGG GGCGACAGAC GTGGAGCGGC AGGCACCGAA CGTCTTCCGC
ATGAAGCTTC TCGGCGCCGA GGTGAAGCCG GTGACTGCGG GTCACGGCAC CCTCAAGGAC
GCCATGAACG AGGCGCTGCG GGACTGGGTG ACCAATGTCG ACAGCACCTA TTACCTGATC
GGCACGGCCG CCGGCCCGCA TCCCTATCCG GAGATGGTAC GCGACTTCCA GGCGGTCATC
GGCGAGGAAG CCAAGCAGCA GATGCTCGAA GCCGAAGGCC GGCTTCCGGA CCTCGTGGTT
GCAGCGGTCG GCGGTGGGTC AAATGCGATA GGCATCTTCC ATCCATTCCT GGATGACGGG
GGCGTCAGGA TCGTCGGCGT TGAAGCCGGT GGCAAGGGCC TGGACGGCGA TGAGCATTGC
GCCTCTCTCA CAGCCGGCTC GCCGGGCGTG CTGCATGGCA ACCGCACTTA TCTGCTCCAG
GACGGTGACG GCCAGATCAA GGAAGGCCAC TCGATTTCGG CCGGGCTCGA TTACCCGGGG
ATCGGACCGG AGCATGCCTG GCTGAACGAT ATCGGCCGCG TCGAATATGT GCCGATCATG
GATCATGAGG CGCTGGAGGC GTTTCAGATC CTGACGCGGC TCGAAGGCAT CATTCCGGCG
CTCGAGCCGT CCCACGCGCT TGCCGAAGTC ATCAAGCGTG CGCCGAAAAT GGGCAAGGAC
GAGATCATCC TGATGAATCT CTCCGGTCGC GGCGACAAGG ACATCTTCAC CGTCGGCAAA
ATTCTCGGTA TGGGGCAATA A
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| Protein sequence | MNQPPKPNSF RSGPDEEGRF GIFGGRFVAE TLMPLILDLQ DEWARAKNDP AFKAELENLG
RHYIGRPSPL YFAERLTAEL GGAKIYFKRE ELNHTGSHKI NNCIGQILLA KRMGKTRIIA
ETGAGQHGVA SATVAARFGL PCVVYMGATD VERQAPNVFR MKLLGAEVKP VTAGHGTLKD
AMNEALRDWV TNVDSTYYLI GTAAGPHPYP EMVRDFQAVI GEEAKQQMLE AEGRLPDLVV
AAVGGGSNAI GIFHPFLDDG GVRIVGVEAG GKGLDGDEHC ASLTAGSPGV LHGNRTYLLQ
DGDGQIKEGH SISAGLDYPG IGPEHAWLND IGRVEYVPIM DHEALEAFQI LTRLEGIIPA
LEPSHALAEV IKRAPKMGKD EIILMNLSGR GDKDIFTVGK ILGMGQ
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