Gene Smed_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3235 
Symbol 
ID5324114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3410229 
End bp3410984 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID640792183 
Producthypothetical protein 
Protein accessionYP_001328894 
Protein GI150398427 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCAT CTCTCAAGCG GCGCCGTGTC AGAGGACCGT CACTTGATGT CGTTCGTGAC 
ATCGAGGTCG CCGGCAAGGT CCTTCCCCTG ACCATTCGGG AAAATGCGCG CGCGACGCGG
ATGACGCTTC GCATCGAGCC CGGTGGCAGG GCGCTGAAGC TCACCGTGCC GGAAGGTCTG
CCGGAGCGTG AGGTCAGCGC CTTTCTCACC CGCCATCAGG GCTGGTTGAT GACCAAGCTT
GCCCGCTTTT CCGGCGAGAG CGAGATCGAG GATGGCGGCA GCATCCTCAT CCGGGGCATT
GCTCATCGCA TCGAGAGGAC CGGCCGCCTG CGCGGTTTGA CCGAGGCGGT CGTCATCGAC
GACGAGGCAG TGCTGAAAGT AGGCGGCGCC GAGGAGCACC TGCGCCGGCG GATTGCCGAT
TACCTGAAGA AGGAGGCGCG CGGCGAGCTC GAGCGTCTCG TCGCCATTTA TACCGGCAGG
TTGGGGCGCA AGGCGCGCTC CATCAGCCTG AAAGACACCC GAAGCCGCTG GGGGTCCTGT
TCCGCCCAAG GCGATTTGAG CTTCTCCTGG CGTATCGCCA TGGCGCCACC GAAGGTGATC
TCCTATCTGG CGGCGCACGA AGTCGCCCAT CTTCAGGAGA TGAATCACGG GCCGGGCTTC
TGGGCGCTGT GCGAAGGCCT TTGCCCTGAA ACGAAAGACG CCAAGCACTG GCTGAAGCGC
AACGGCACCA TGCTGCATGC GATCGATTTC AGCTAG
 
Protein sequence
MFSSLKRRRV RGPSLDVVRD IEVAGKVLPL TIRENARATR MTLRIEPGGR ALKLTVPEGL 
PEREVSAFLT RHQGWLMTKL ARFSGESEIE DGGSILIRGI AHRIERTGRL RGLTEAVVID
DEAVLKVGGA EEHLRRRIAD YLKKEARGEL ERLVAIYTGR LGRKARSISL KDTRSRWGSC
SAQGDLSFSW RIAMAPPKVI SYLAAHEVAH LQEMNHGPGF WALCEGLCPE TKDAKHWLKR
NGTMLHAIDF S