Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3235 |
Symbol | |
ID | 5324114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3410229 |
End bp | 3410984 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792183 |
Product | hypothetical protein |
Protein accession | YP_001328894 |
Protein GI | 150398427 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCAT CTCTCAAGCG GCGCCGTGTC AGAGGACCGT CACTTGATGT CGTTCGTGAC ATCGAGGTCG CCGGCAAGGT CCTTCCCCTG ACCATTCGGG AAAATGCGCG CGCGACGCGG ATGACGCTTC GCATCGAGCC CGGTGGCAGG GCGCTGAAGC TCACCGTGCC GGAAGGTCTG CCGGAGCGTG AGGTCAGCGC CTTTCTCACC CGCCATCAGG GCTGGTTGAT GACCAAGCTT GCCCGCTTTT CCGGCGAGAG CGAGATCGAG GATGGCGGCA GCATCCTCAT CCGGGGCATT GCTCATCGCA TCGAGAGGAC CGGCCGCCTG CGCGGTTTGA CCGAGGCGGT CGTCATCGAC GACGAGGCAG TGCTGAAAGT AGGCGGCGCC GAGGAGCACC TGCGCCGGCG GATTGCCGAT TACCTGAAGA AGGAGGCGCG CGGCGAGCTC GAGCGTCTCG TCGCCATTTA TACCGGCAGG TTGGGGCGCA AGGCGCGCTC CATCAGCCTG AAAGACACCC GAAGCCGCTG GGGGTCCTGT TCCGCCCAAG GCGATTTGAG CTTCTCCTGG CGTATCGCCA TGGCGCCACC GAAGGTGATC TCCTATCTGG CGGCGCACGA AGTCGCCCAT CTTCAGGAGA TGAATCACGG GCCGGGCTTC TGGGCGCTGT GCGAAGGCCT TTGCCCTGAA ACGAAAGACG CCAAGCACTG GCTGAAGCGC AACGGCACCA TGCTGCATGC GATCGATTTC AGCTAG
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Protein sequence | MFSSLKRRRV RGPSLDVVRD IEVAGKVLPL TIRENARATR MTLRIEPGGR ALKLTVPEGL PEREVSAFLT RHQGWLMTKL ARFSGESEIE DGGSILIRGI AHRIERTGRL RGLTEAVVID DEAVLKVGGA EEHLRRRIAD YLKKEARGEL ERLVAIYTGR LGRKARSISL KDTRSRWGSC SAQGDLSFSW RIAMAPPKVI SYLAAHEVAH LQEMNHGPGF WALCEGLCPE TKDAKHWLKR NGTMLHAIDF S
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