| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3220 |
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| Symbol | gyrB |
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| ID | 5324099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3393136 |
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| End bp | 3395571 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792168 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001328879 |
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| Protein GI | 150398412 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA TTTCTGAGAC CGAAGCCGGC GCAATCGCCG AATATGGTGC CGATTCCATC
AAGGTGCTGA AAGGCCTCGA TGCCGTACGC AAGCGCCCGG GCATGTATAT CGGCGACACC
GACGACGGCT CAGGTTTGCA CCACATGGTC TACGAAGTCG TGGACAACGC GATCGACGAG
GCTTTGGCAG GGCACGCGGA TCTGGTTACG GTGACGCTCA ACCCCGACGG CTCCGTAACC
GTGACCGACA ACGGCCGCGG TATACCGACC GACATTCACA GGGAAGAGGG CGTCTCGGCG
GCGGAAGTCA TCATGACGCA GCTTCATGCC GGCGGGAAAT TCGACCAGAA TTCCTACAAG
GTCTCCGGCG GTCTGCACGG CGTCGGCGTT TCGGTCGTCA ACGCCCTTTC CGTGTCGCTG
AAGCTCAAGA TTCGCCGTTC GGGCAAGATC CACGAAATGA GCTTCACCCA CGGCGTTGCC
GACGGGCCGC TCAAAGTGAC GGGCGACGCC GGCAGCGACA CCGGGACGGA GGTGACCTTC
ACGCCGAGCG AACAGACCTT TTCGAACATC GAATTCGAGT TCGCCAGGCT CGAGCATCGC
CTGCGCGAAC TCGCCTTCCT GAATTCCGGC GTCCGCATCG TGCTGACCGA CAAGCGTCAT
TCTGACATCA GGCGTGAGGA ACTGATGTAT GACGGTGGCC TCGAGGCCTT CGTCGCCTAT
CTCGACCGGG CGAAGAAACC GCTCGTGCAG AAGCCGGTCT CGATTAGAGG CGAGAAGGAC
GGCATCACCG TAGAGGTGGC CATGTGGTGG AACGACAGCT ATCACGAGAA CATGCTGTGC
TTCACCAACA ACATTCCGCA GCGTGACGGC GGCACGCATA TGGCCGGCTT CCGTGCCGCG
CTCACGCGTC AGATCACCTC CTATGCCGAC AGTTCCGGCG TCACCAAGAA GGAGAAGGTG
TCGCTCACGG GCGACGATTG CCGAGAGGGC CTGACGGCTG TGCTGTCGGT TAAGGTCCCC
GATCCCAAGT TCTCTTCGCA GACCAAGGAC AAATTGGTGT CCTCCGAAGT CCGCCCGGTC
GTCGAGAGCC TGGTCAACGA GGCCCTGGGC GTCTGGCTTG AAGAACATCC TTCCGACGCC
AAGATTCTCG TGGGAAAGGT CGTCGAGGCC GCGGCCGCGC GCGAAGCGGC GCGCAAGGCG
CGCGAACTGA CGCGCCGGAA GGGTGCGCTC GACATCTCCT CGCTTCCCGG CAAGCTCGCC
GATTGCTCGG AACGCGACCC GGCCAAGTCG GAACTCTTCC TGGTGGAGGG CGACTCGGCG
GGCGGCTCCG CCAAACAGGG CCGCTCGCGC GAAAGCCAGG CGATCCTGCC GCTGCGAGGC
AAGATCCTCA ACGTCGAGCG CGCGCGTTTC GACAAGATGC TGTCGAGCCA GGAAATCGGC
ACGCTGATCA CCGCGCTCGG CACGTCGATC GGCCCGGACG AGTTCAATGC CGACAAGCTG
CGCTATCACA AGATCATCAT CATGACGGAT GCCGACGTCG ACGGCGCTCA CATCCGCACG
CTGCTGCTCA CCTTCTTCTT CCGGCAGATG CCGGTGCTGA TCGAGCGCGG CCACCTCTAC
ATCGCCCAGC CGCCGCTCTA TAAGGTGGCA CGCGGCAAGT CCGTCCAGTA TCTCAAGGAT
GAGAAGGCGC TCGAAGACTA CCTGATCAAT ATGGGCCTGG AGGAGGCTTC CCTCGAACTC
GCTTCGGGCG AGGTGCGTGC CGGTCAGGAT CTTCGCGAAG TCATCAACGA CGCGCTCCGG
CTGCGGTCGC TGATGGATGG GCTCCACTCC CGCTACAACC GCTCCGTCGT GGAGCAGGCT
GCGATTGCCG GAGCGCTCAA TGTGGAACTG AACGGCCAAC GCAACGAATA TCAGCAGATC
GCCGCTGAAG TCGCCCGCCG GCTTGACGTC ATCGCCGAGG AGACCGAGCG CGGCTGGGCG
GCAGAGGTGA CCGCCGAGGG CGGCCTGAAG CTGGAGCGCA TGGTGCGCGG CGTCAAGGAA
GCGGCTGTGC TCGACATGGC GCTGATCGGC TCGTCCGATG CCCGGCATAT CGACCAGCTC
AAGAGCCGGT TGAAGGAAGT CTACGGCGCA CCGCCGATGC TGCGCCGCCG CGACGGAACG
CAGGAGATCA GCGGCCCGCG CGCTCTTCTG GACGCGATCT TCGCCGCCGG CCGCAAGGGT
CTTACCATGC AGCGCTACAA GGGCCTCGGC GAAATGAACG CCGAGCAGTT GTGGGAAACG
ACGCTCGATC CGAACGTTCG CTCGCTGCTG CAGGTCAAGG TAAACGACGC TACGGATGCG
GACGGTCTGT TCTCGCGCCT GATGGGCGAC GAAGTGGAAC CGCGGCGCGA CTTCATCCAG
GAAAACGCGC TGAGCGTCGC CAACCTCGAT ATCTGA
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| Protein sequence | MTEISETEAG AIAEYGADSI KVLKGLDAVR KRPGMYIGDT DDGSGLHHMV YEVVDNAIDE
ALAGHADLVT VTLNPDGSVT VTDNGRGIPT DIHREEGVSA AEVIMTQLHA GGKFDQNSYK
VSGGLHGVGV SVVNALSVSL KLKIRRSGKI HEMSFTHGVA DGPLKVTGDA GSDTGTEVTF
TPSEQTFSNI EFEFARLEHR LRELAFLNSG VRIVLTDKRH SDIRREELMY DGGLEAFVAY
LDRAKKPLVQ KPVSIRGEKD GITVEVAMWW NDSYHENMLC FTNNIPQRDG GTHMAGFRAA
LTRQITSYAD SSGVTKKEKV SLTGDDCREG LTAVLSVKVP DPKFSSQTKD KLVSSEVRPV
VESLVNEALG VWLEEHPSDA KILVGKVVEA AAAREAARKA RELTRRKGAL DISSLPGKLA
DCSERDPAKS ELFLVEGDSA GGSAKQGRSR ESQAILPLRG KILNVERARF DKMLSSQEIG
TLITALGTSI GPDEFNADKL RYHKIIIMTD ADVDGAHIRT LLLTFFFRQM PVLIERGHLY
IAQPPLYKVA RGKSVQYLKD EKALEDYLIN MGLEEASLEL ASGEVRAGQD LREVINDALR
LRSLMDGLHS RYNRSVVEQA AIAGALNVEL NGQRNEYQQI AAEVARRLDV IAEETERGWA
AEVTAEGGLK LERMVRGVKE AAVLDMALIG SSDARHIDQL KSRLKEVYGA PPMLRRRDGT
QEISGPRALL DAIFAAGRKG LTMQRYKGLG EMNAEQLWET TLDPNVRSLL QVKVNDATDA
DGLFSRLMGD EVEPRRDFIQ ENALSVANLD I
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