Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3215 |
Symbol | |
ID | 5324094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3389549 |
End bp | 3390097 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792163 |
Product | FxsA cytoplasmic membrane protein |
Protein accession | YP_001328874 |
Protein GI | 150398407 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCC TGATCCCGCT CCTCATTCTC GGGCTGCCGC TCGCCGAAAT CGCCGGCTTC GTTGCCGTCG GACGCGAAAT CGGCGTGGCG ATGACACTTC TCCTTGTTTT CTTAAGCGCC ATCGCCGGCA TCATGCTCCT GCGCATCCAA GGATTCAGCG TACTCCGGCG CGTGCAGGAA GCGGCCCGAA CGGGCATTGA TCCCGGGCTC GACGTCCTCG GAGGCGTGCT GGTGTTCATC GCCGCAATTC TTTTGATCGT GCCGGGCTTC ATCAGCGACA TTCTCGGCGT CTTCATCTTC CTGCCCCCGG TCCGTCGCGC CGTCGCTGCC TTTCTGCGCA GCCGGATAAC GATATTGAGC AGCGCCCCCG GATACGGATC CTCCAATCCT CAATCCTCTG GTCCCCACTC CACTGACCCC GGATCTTCGG GACCTCGGCG GGAGGACCGC CGCGGGCCGC TGATCATTGA TCTCGAGGAG GACGAATTCT CGCGCAAGAA GAAGGACGAG GACGGGCCAG AGCCACCGAC GAACCGTCTG TCTCGCTAA
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Protein sequence | MRFLIPLLIL GLPLAEIAGF VAVGREIGVA MTLLLVFLSA IAGIMLLRIQ GFSVLRRVQE AARTGIDPGL DVLGGVLVFI AAILLIVPGF ISDILGVFIF LPPVRRAVAA FLRSRITILS SAPGYGSSNP QSSGPHSTDP GSSGPRREDR RGPLIIDLEE DEFSRKKKDE DGPEPPTNRL SR
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