Gene Smed_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3215 
Symbol 
ID5324094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3389549 
End bp3390097 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID640792163 
ProductFxsA cytoplasmic membrane protein 
Protein accessionYP_001328874 
Protein GI150398407 
COG category[R] General function prediction only 
COG ID[COG3030] Protein affecting phage T7 exclusion by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCC TGATCCCGCT CCTCATTCTC GGGCTGCCGC TCGCCGAAAT CGCCGGCTTC 
GTTGCCGTCG GACGCGAAAT CGGCGTGGCG ATGACACTTC TCCTTGTTTT CTTAAGCGCC
ATCGCCGGCA TCATGCTCCT GCGCATCCAA GGATTCAGCG TACTCCGGCG CGTGCAGGAA
GCGGCCCGAA CGGGCATTGA TCCCGGGCTC GACGTCCTCG GAGGCGTGCT GGTGTTCATC
GCCGCAATTC TTTTGATCGT GCCGGGCTTC ATCAGCGACA TTCTCGGCGT CTTCATCTTC
CTGCCCCCGG TCCGTCGCGC CGTCGCTGCC TTTCTGCGCA GCCGGATAAC GATATTGAGC
AGCGCCCCCG GATACGGATC CTCCAATCCT CAATCCTCTG GTCCCCACTC CACTGACCCC
GGATCTTCGG GACCTCGGCG GGAGGACCGC CGCGGGCCGC TGATCATTGA TCTCGAGGAG
GACGAATTCT CGCGCAAGAA GAAGGACGAG GACGGGCCAG AGCCACCGAC GAACCGTCTG
TCTCGCTAA
 
Protein sequence
MRFLIPLLIL GLPLAEIAGF VAVGREIGVA MTLLLVFLSA IAGIMLLRIQ GFSVLRRVQE 
AARTGIDPGL DVLGGVLVFI AAILLIVPGF ISDILGVFIF LPPVRRAVAA FLRSRITILS
SAPGYGSSNP QSSGPHSTDP GSSGPRREDR RGPLIIDLEE DEFSRKKKDE DGPEPPTNRL
SR