Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3191 |
Symbol | |
ID | 5324070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3362382 |
End bp | 3363794 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792139 |
Product | Fmu (Sun) domain-containing protein |
Protein accession | YP_001328850 |
Protein GI | 150398383 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.97576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAG ACAGCAAGAA CGATTCTCAT CCGAAACGAA TCCGAGAACA CAGGCGCCCC GGATTGGGAG GGCCCAAGGC CGGCGCGCTT GCCCCGGCCA AACCGGGCTT GAAGAGCCGC CAGGCAGCGG CGAAGATCCT TGCGGCGGTG GTCGACCGGA AAACGCCGCT CGACGGGATG CTGGACCCGG AGCGGGGCAA CCCGGTCTAT CGTGAGTTGA ACGATGCCGA CCGCGCGCTG GTGCGCGCCA TTCTGAACTC CGCACTGCGC CATCTGCCAC GCATCCGCGC GGCGATCGAT TCCCTGCTGC AGACACCATT GCCTGAGGGT GCGCGGGCAC TCGAACATGT CCTGACCGTT GCTGCCGCAC AAATTCTCTA TCTTGATGTT CCGGATCATT CCGCCGTCGA CCTCGCAGTG GAACAGGCCC AGTCCGATCC GCGAAATCGC CGTTTCGCCA GCCTTGTCAA TGCGGTGCTG CGGCGGCTTT CGCGTGAAAA GGAGGCGATT CTCGAACGTC TGCAACAGGT GCCGGCGATG CCGGGCTGGT TCTTCGACAG GCTCGTCACC TGTTACGGAC GCGATCAAGC GGAGCGCATC TCTGACGCGC AGCTCGTACC CGCCGCCATC GATGTCACCG TTAAATCCGA TGCAGCTTCC TGGGCCGACC GGCTCAACGG CACCGTGTTG CCGACCGGTT CCGTTCGACT TCAGGATTTT GACGGCTCCA TTCCGTCTCT GCCCGGTTTT TCGGAGGGCG GATGGTGGGT CCAGGATGCG GCTGCCTCCA TTCCGGCGCG CCTCTTCGGA GATATTTCCG GCAGAAAGGT GGTCGACCTT TGTGCCGCGC CCGGCGGCAA GACGGCGCAA CTCGTTCTCG CAGGGGCAAA GGTGATCGCG CTGGATCAGT CTTCCAGCCG CCTCCGGCGA CTCAAGGCCA ACCTTGAGCG GCTTGGATTA GAGAGCGCGA CGAAGGAGGC CGACATGGCC GATTTCCGGC CGGAAGAACT CTTCGACGCC GCCCTTCTCG ACGCCCCCTG CTCGTCGACC GGCACCACCC GGCGGCATCC CGATGTGCTC TGGACAAAAG GCCCTGATGA CGTCGAGAAG CTTGCCGGGC TGCAAGAGCG GCTGCTGCGG CATGCACTCA CCCTGGTGAA GCCCGGAGGG CTTCTCGTCT TTTCCAACTG TTCGCTCGAC CCGCGCGAGG GCGAGGAGGT CGTGGCGCGC GTCGTTGCCG ACGGCGGATG CGAGCGGGTG CCGATCGACG CGGCCGCCTG GCCTGGGCTC GAACAGGCGA TTACCGCCCT CGGAGAATTC CGGACGACAC CGGCGATGCT GTCCCTTGGA CCGCCTTTCG CCAGCGGTCT GGATGGTTTC TATGCGGCCG TGTTGCGCCG GGCCGACGCC TGA
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Protein sequence | MPEDSKNDSH PKRIREHRRP GLGGPKAGAL APAKPGLKSR QAAAKILAAV VDRKTPLDGM LDPERGNPVY RELNDADRAL VRAILNSALR HLPRIRAAID SLLQTPLPEG ARALEHVLTV AAAQILYLDV PDHSAVDLAV EQAQSDPRNR RFASLVNAVL RRLSREKEAI LERLQQVPAM PGWFFDRLVT CYGRDQAERI SDAQLVPAAI DVTVKSDAAS WADRLNGTVL PTGSVRLQDF DGSIPSLPGF SEGGWWVQDA AASIPARLFG DISGRKVVDL CAAPGGKTAQ LVLAGAKVIA LDQSSSRLRR LKANLERLGL ESATKEADMA DFRPEELFDA ALLDAPCSST GTTRRHPDVL WTKGPDDVEK LAGLQERLLR HALTLVKPGG LLVFSNCSLD PREGEEVVAR VVADGGCERV PIDAAAWPGL EQAITALGEF RTTPAMLSLG PPFASGLDGF YAAVLRRADA
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