Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3179 |
Symbol | |
ID | 5324058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3344467 |
End bp | 3345159 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792127 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_001328838 |
Protein GI | 150398371 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTC CACTTTCACT GACCGCCTGG ATCTGGCTGA TGACCATCGT TCTCGTCGTC GCCTTTATGC CCTTCGATCC GCACCTTTCG CGATGGGCGC AAGCTCTGCC GGAGGAGATC ATCGGCTTCA ACCGCGCCAT CACCGATGTC GGCACTTTTG CCTGGATGAT ATACACCTCT GCCACTCTGC TGCTGATCGC CTTCGTGATC AGGCGAGCTT CGGCGCGCGA CACCCTGAGG CAGAGGGCGC GCGCCGCACG CAATCTCTCC GCATACTTCC TGCTGACGAT CGGCACGGCG AGTGCGCTGG TGCACGGCTT GAAGTTTCTG ATCGGCCGCG CCCGTCCCGA ACTGCTTGCC GATTACGGTC CGTACAGCCT TACGCCCTTC ACCGGCAACA CGGTTTTCGA AAGCTTTCCG TCCGGCCATT CCACCGCCGC CGGGGCCTTC TTCGGCGCCT TCGCGATGGT GATGCCGCAG CTTCGGCCCC TTTTTCTGCT GCTGGCCCTG CTCGTAGGGA TCTCGCGCGT CGTCGTCGGA GCGCATTATC CGAGCGATGT CGCCGCCGGC CTGCTGCTCG GGCTTTGGGT CGCACTGATG ATGGCGTTCG TCTTCGCCCG GCAGGACTGG GTCTTCAAGC CGGGCCCATA CGGCTGGCCG GTGCTGCGGC ATGCGACGCC CGAGAGCAAA TAA
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Protein sequence | MNRPLSLTAW IWLMTIVLVV AFMPFDPHLS RWAQALPEEI IGFNRAITDV GTFAWMIYTS ATLLLIAFVI RRASARDTLR QRARAARNLS AYFLLTIGTA SALVHGLKFL IGRARPELLA DYGPYSLTPF TGNTVFESFP SGHSTAAGAF FGAFAMVMPQ LRPLFLLLAL LVGISRVVVG AHYPSDVAAG LLLGLWVALM MAFVFARQDW VFKPGPYGWP VLRHATPESK
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