Gene Smed_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3179 
Symbol 
ID5324058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3344467 
End bp3345159 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID640792127 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_001328838 
Protein GI150398371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC CACTTTCACT GACCGCCTGG ATCTGGCTGA TGACCATCGT TCTCGTCGTC 
GCCTTTATGC CCTTCGATCC GCACCTTTCG CGATGGGCGC AAGCTCTGCC GGAGGAGATC
ATCGGCTTCA ACCGCGCCAT CACCGATGTC GGCACTTTTG CCTGGATGAT ATACACCTCT
GCCACTCTGC TGCTGATCGC CTTCGTGATC AGGCGAGCTT CGGCGCGCGA CACCCTGAGG
CAGAGGGCGC GCGCCGCACG CAATCTCTCC GCATACTTCC TGCTGACGAT CGGCACGGCG
AGTGCGCTGG TGCACGGCTT GAAGTTTCTG ATCGGCCGCG CCCGTCCCGA ACTGCTTGCC
GATTACGGTC CGTACAGCCT TACGCCCTTC ACCGGCAACA CGGTTTTCGA AAGCTTTCCG
TCCGGCCATT CCACCGCCGC CGGGGCCTTC TTCGGCGCCT TCGCGATGGT GATGCCGCAG
CTTCGGCCCC TTTTTCTGCT GCTGGCCCTG CTCGTAGGGA TCTCGCGCGT CGTCGTCGGA
GCGCATTATC CGAGCGATGT CGCCGCCGGC CTGCTGCTCG GGCTTTGGGT CGCACTGATG
ATGGCGTTCG TCTTCGCCCG GCAGGACTGG GTCTTCAAGC CGGGCCCATA CGGCTGGCCG
GTGCTGCGGC ATGCGACGCC CGAGAGCAAA TAA
 
Protein sequence
MNRPLSLTAW IWLMTIVLVV AFMPFDPHLS RWAQALPEEI IGFNRAITDV GTFAWMIYTS 
ATLLLIAFVI RRASARDTLR QRARAARNLS AYFLLTIGTA SALVHGLKFL IGRARPELLA
DYGPYSLTPF TGNTVFESFP SGHSTAAGAF FGAFAMVMPQ LRPLFLLLAL LVGISRVVVG
AHYPSDVAAG LLLGLWVALM MAFVFARQDW VFKPGPYGWP VLRHATPESK