| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3139 |
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| Symbol | |
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| ID | 5324018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3288619 |
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| End bp | 3292173 |
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| Gene Length | 3555 bp |
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| Protein Length | 1184 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792089 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_001328800 |
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| Protein GI | 150398333 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTC TGAAATTGCA CTTCATTCCT CGACTCGCTA ATAGTCTTTT CGCGGGTGCA
GCATTCCCGC GTGTCCAAGA CCATGAGGAG TCCGACTTGT CCATATCGAA GATCCTTGTC
GCCAACCGTT CCGAAATTGC CATCCGCGTC TTCCGCGCGG CCAATGAGCT GGGGCTTAAA
ACGGTCGCGA TATGGGCTGA GGAGGACAAG CTGGCGCTGC ACCGCTTCAA GGCGGACGAG
AGTTATCAGG TCGGACGAGG GCCGCACCTT CCCCGTGACC TCGGGCCGAT CGAAAGCTAT
CTTTCGATCG ACGAAGTGAT CCGCGTCGCC AAGCTGTCCG GCGCGGACGC CATACATCCG
GGCTACGGCC TGCTTTCCGA AAGCCCCGAG TTCGCCGAGG CTTGCGCCGT AAACGGCATC
ACCTTCATCG GCCCGAAGCC GGAGACGATG CGTCAGCTCG GCAACAAGGT TGCGGCCCGC
AATCTCGCGA TCTCCGTTGG CGTGCCGGTC GTGCCGGCGA CCGAGCCGTT GCCGGACGAT
ACGGACGAGA TCAAGCGGCT GGCCGAGGAG ATCGGCTATC CGGTGATGCT GAAAGCTTCC
TGGGGCGGCG GCGGCCGCGG CATGCGGGCG ATTCGAGACC CCAAGGACCT GATCCGCGAG
GTGACCGAGG CCAAGCGTGA GGCGAAGGCT GCCTTCGGCA AGGACGAGGT CTATCTCGAG
AAGCTCGTCG AGCGTGCCCG CCACGTCGAA AGCCAGATCC TCGGCGACAC GCATGGCAAT
GTCGTCCACC TGTTCGAGCG CGACTGCTCG ATTCAGCGGC GCAACCAGAA GGTCGTGGAG
CGCGCGCCGG CACCCTATCT CACCGAGGCG CAGCGCCAGG AACTCGCCGA CTACTCGCTG
AAGATCGCCA GGGCGACCAG CTATATCGGC GCCGGCACGG TCGAGTATCT GATGGATGCC
GACACCGGCA GATTCTACTT CATCGAGGTC AATCCGCGCA TCCAGGTCGA GCATACGGTG
ACCGAGGTCG TCACCGGCAT CGACATCGTG AAGGCGCAGA TCCACATTCT CGACGGCTTT
GCCATCGGGT CACCGGAATC GGGCGTGCCG CGTCAGGAGG ATATCCGTCT TAACGGGCAT
GCACTGCAAT GCCGCATCAC GACGGAAGAT CCGGAGCAGA ATTTCATCCC GGATTACGGT
CGCATCACCG CCTATCGCGG CGCCACCGGC TTCGGCATCC GCCTCGATGG CGGCACCGCC
TATTCCGGTG CCGTGATCAC CCGCTTTTAC GACCCGCTTC TCGAGAAGGT GACCGCCTGG
GCGCCGAACC CGGACGAGGC GATAAAGCGG ATGGTCCGTG CGTTACGGGA GTTCCGCATC
CGTGGCGTGG CCACCAATCT CACCTTCCTC GAGGCGATCA TCAGCCACCC GAAATTCCAC
GACAACAGCT ATACCACGCG ATTCATCGAC ACGACGCCGG AGCTGTTCCA GCAGGTGAAG
CGTCAGGACC GCGCCACCAA GCTGCTCACC TATCTTGCCG ACGTGACCGT CAACGGTCAT
CCGGAAGCCA AGGGCCGGCC GATGCCCTCA GAGGACATCG CCTCCCCGCT CGTGCCGTTC
ATCGGCGACG AGGTGAAGCC GGGAACCAAG CAGCGCCTCG ATCAGCTCGG TCCGAAGAAA
TTCGCCGAAT GGGTAAAGGC ACGCAAGGAA GTGCTGATCA CCGACACGAC GATGCGCGAC
GGCCACCAGT CGCTGCTCGC CACCCGCATG CGCACCTATG ACATCGCCCG CATCGCCGAC
ACCTATGCGC GGGCGCTGCC GGGTCTCTTC TCGCTCGAAT GCTGGGGCGG GGCGACCTTC
GACGTCTCGA TGCGCTTTCT GACCGAGGAT CCGTGGGAGC GGCTGGCGAT GGTGCGGGAG
GGCGCGCCGA ACCTGCTGCT GCAGATGCTT CTGCGCGGTG CGAACGGTGT CGGCTACAAG
AACTATCCCG ACAACGTCGT CAAATATTTC GTCCGCCAGG CCGCCAAGGG CGGCATCGAT
GTCTTCCGCG TCTTCGACTG CCTGAACTGG GTCGAGAACA TGCGCGTCTC GATGGATGCG
GTGGCGGAAG AGAACAGGAT CTGCGAGGCG GCGATCTGCT ATACCGGCGA TATTCTGAAT
TCAGCCCGGC CGAAATACGA CCTGAAATAT TATACGGCGC TTGCGGCCGA GCTTGAAAAG
GCCGGCGCCC ACATGATCGC CGTCAAGGAC ATGGCCGGGC TCCTGAAGCC CGCCGCGGCG
CGCGTGCTCT TCAAGGCGCT GAAAGAGGCG ACCGACCTGC CGATCCACTT CCACACGCAC
GACACGTCGG GCATTGCCGC GGCGACGGTG CTCGCAGCCG TCGAATCCGG CGTCGATGTC
GTCGATGCGG CGATGGATGC GCTCTCGGGC AATACCTCGC AGCCCTGCCT CGGGTCGATC
GTCGAGGCGC TGTCCGGTTC GGAGCGCGAC CCGGGCCTCG ATCCGGAATG GATCCGCCGC
ATCTCCTTCT ACTGGGAGGC CGTTCGCCAC CAGTATGCGG CCTTCGAGAG CGACCTCAAG
GGGCCGGCCT CGGAAGTCTA TCTGCATGAA ATGCCCGGGG GCCAGTTTAC CAATCTGAAG
GAACAGGCTC GCTCGCTCGG TCTCGAAACC CGCTGGCACG AGGTTGCACA GGCCTATGCC
GACGCGAACC GGATGTTCGG CGACATCGTC AAGGTGACGC CCTCCTCCAA GGTGGTCGGC
GATATGGCGC TGATGATGGT GAGCCAGGAC CTGACAGTTG CCGATGTCGA GAATCCGGGC
AAGGACATAG CCTTCCCCGA ATCGGTCGTA TCCATGCTCA AGGGCGATCT CGGTCAACCG
CCGGGCGGCT GGCCGGAGGC GCTGCAGAAG AAGGCGCTGA AAGGCGAGGT GGCCTATGAC
GCGCGTCCGG GCTCGCTGCT CGAAGACGCC GATCTCGACG CCGAACGCAA GGACATAGAG
GAGAAGCTCG GTCGCGAGGT GACCGATTTC GAGTTCGCCT CCTATCTCAT GTATCCCAAG
GTCTTCACCG ATTATGCGGT GGCCTGCGAA ACCTACGGCC CCGTCAGCGT ACTGCCGACG
CCCGCCTACT TCTACGGCAT GGCGCCGGGT GAGGAACTCT TCGCCGAGAT CGAGAAGGGC
AAGACGCTGG TCATCCTCAA TCAGGCGCAG GGCGAGATGG ACGAGAAGGG CATGGTCAAG
ATGTTCTTCG AACTGAACGG CCAGCCGCGT TCGATCAAGG TGCCCGACCG CAACCGCGGC
GCTTCGACGG CCATCCGCCG GAAGGCGGAA TCCGGCAATG CCGCACATCT CGGCGCGCCG
ATGCCGGGCG TCATCTCCAC CGTCGCGGTC GCCAGCGGCC AGTCGGTCAA GGCCGGCGAC
GTGCTGCTCT CCATCGAGGC GATGAAAATG GAGACAGCGC TGCATGCGGA GAAGGACGGC
GTCGTCGCGG AGGTGCTGGT CAACGCCGGC GATCAGATCG ATGCCAAGGA TCTGCTGATC
GTGTTCGGGG AGTAG
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| Protein sequence | MSRLKLHFIP RLANSLFAGA AFPRVQDHEE SDLSISKILV ANRSEIAIRV FRAANELGLK
TVAIWAEEDK LALHRFKADE SYQVGRGPHL PRDLGPIESY LSIDEVIRVA KLSGADAIHP
GYGLLSESPE FAEACAVNGI TFIGPKPETM RQLGNKVAAR NLAISVGVPV VPATEPLPDD
TDEIKRLAEE IGYPVMLKAS WGGGGRGMRA IRDPKDLIRE VTEAKREAKA AFGKDEVYLE
KLVERARHVE SQILGDTHGN VVHLFERDCS IQRRNQKVVE RAPAPYLTEA QRQELADYSL
KIARATSYIG AGTVEYLMDA DTGRFYFIEV NPRIQVEHTV TEVVTGIDIV KAQIHILDGF
AIGSPESGVP RQEDIRLNGH ALQCRITTED PEQNFIPDYG RITAYRGATG FGIRLDGGTA
YSGAVITRFY DPLLEKVTAW APNPDEAIKR MVRALREFRI RGVATNLTFL EAIISHPKFH
DNSYTTRFID TTPELFQQVK RQDRATKLLT YLADVTVNGH PEAKGRPMPS EDIASPLVPF
IGDEVKPGTK QRLDQLGPKK FAEWVKARKE VLITDTTMRD GHQSLLATRM RTYDIARIAD
TYARALPGLF SLECWGGATF DVSMRFLTED PWERLAMVRE GAPNLLLQML LRGANGVGYK
NYPDNVVKYF VRQAAKGGID VFRVFDCLNW VENMRVSMDA VAEENRICEA AICYTGDILN
SARPKYDLKY YTALAAELEK AGAHMIAVKD MAGLLKPAAA RVLFKALKEA TDLPIHFHTH
DTSGIAAATV LAAVESGVDV VDAAMDALSG NTSQPCLGSI VEALSGSERD PGLDPEWIRR
ISFYWEAVRH QYAAFESDLK GPASEVYLHE MPGGQFTNLK EQARSLGLET RWHEVAQAYA
DANRMFGDIV KVTPSSKVVG DMALMMVSQD LTVADVENPG KDIAFPESVV SMLKGDLGQP
PGGWPEALQK KALKGEVAYD ARPGSLLEDA DLDAERKDIE EKLGREVTDF EFASYLMYPK
VFTDYAVACE TYGPVSVLPT PAYFYGMAPG EELFAEIEKG KTLVILNQAQ GEMDEKGMVK
MFFELNGQPR SIKVPDRNRG ASTAIRRKAE SGNAAHLGAP MPGVISTVAV ASGQSVKAGD
VLLSIEAMKM ETALHAEKDG VVAEVLVNAG DQIDAKDLLI VFGE
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