| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3134 |
|---|
| Symbol | |
|---|
| ID | 5324013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 3283841 |
|---|
| End bp | 3285031 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640792084 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001328795 |
|---|
| Protein GI | 150398328 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGC GCACAGATTC CGCCCCGCAG GCCATTGGCC GGCAAGGATA TATGTCCAGG
AACCGGCTCG CCGTGTCTCT CCTGTTTCTT ATGAACGGCT TCGTCACGGG TAGTTGGGCG
CCCAAGATAC CGGAGTTCAA GGAGCGCCTC GGCATAGGCG AAAGCGTCCT CGGACTTCTC
ATCCTGGGAT TCGGCGTCGG TTCGCTGGTG CTGATGCCGA TCGCAGGCGG CTTTATCGCC
CGCCTCGGTT CGCAAAAGGT CGTCAAGGTC ACGGCCATAA TCCTTTCACC GCTGCTTCTC
CTTCTGACGC TCCTGCCCAA TCTGTGGACG GCCGCGCTTG GTTTGTTCCT GCTCGGTGGC
TTCGTGGGCG CAATGGACGT GGCCATGAAC GCCAATGCCG TCGAGGTCGA AAAGTCGATG
CGGCGCGCCA TCATGTCATC GTGTCATGCC TATTGGAGCC TTGGCGGGTT GATCGGCGCG
GGGATCGGCG GCTTCCTGAT GGCACGTTTC GGCGTGCTGC CGCATGCGAT GGTCGTTACC
GTTCTCTGTC TCGTTATTCT CGCCGTTGCC TGGCCGATGA TCCTCGCCGA CCGGCCGCAT
CTGGCGGAAA GCCGGGAAAA GCTCCGCTTG CCGATGACGC CGCTGCCCTG GCTGATCGGC
ATCATGGCGC TTTTCTCGAT GGTGCCCGAG GGAGCCGTCC TCGATTGGGG GGCGCTCTAT
CTCAAGAATG AACTCGGCGC ATCCGTCGAA CTTTCAGGCT TTGGCTTTGC CGCCTTCTCG
GCCACCATGG CGGCCATGCG CTTTGCCGGC GATCACGTGC GCGACCGGTT CGGAGCGAAG
CGGACCCTGC GCATCTCCAC CGTGACGGCG CTCGCCGGCA TGGTGCTCGC CGGCCTCGCC
CCCAATGCCG TTCTTGCTAT CCTCGGTTTT GCGCTTGCAG GCGTGGGGAT ATCCAACATG
GTTCCGATCG CTTTCTCCGC GGCCGGCAAC ATGCCGGGCC TGCAGCCAGG AATAGGGCTG
TCGGTCGCCA CCACGATGGG TTATTCCGGC ATGCTGTTTG CGCCCTCCTT GATCGGCTTC
ATCGCGGAAC ACAGCGGTTT TGCCATCGTT TTCGCATGCG TTCCCGTGCT CTTCATCGTC
GTGCTCCTGC TCTCGCACCA CGCCGTACAC GCGGATCACG CCAAGGGGTA G
|
|---|
| Protein sequence | MDQRTDSAPQ AIGRQGYMSR NRLAVSLLFL MNGFVTGSWA PKIPEFKERL GIGESVLGLL
ILGFGVGSLV LMPIAGGFIA RLGSQKVVKV TAIILSPLLL LLTLLPNLWT AALGLFLLGG
FVGAMDVAMN ANAVEVEKSM RRAIMSSCHA YWSLGGLIGA GIGGFLMARF GVLPHAMVVT
VLCLVILAVA WPMILADRPH LAESREKLRL PMTPLPWLIG IMALFSMVPE GAVLDWGALY
LKNELGASVE LSGFGFAAFS ATMAAMRFAG DHVRDRFGAK RTLRISTVTA LAGMVLAGLA
PNAVLAILGF ALAGVGISNM VPIAFSAAGN MPGLQPGIGL SVATTMGYSG MLFAPSLIGF
IAEHSGFAIV FACVPVLFIV VLLLSHHAVH ADHAKG
|
|---|
| |