Gene Smed_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3126 
Symbol 
ID5324005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3274961 
End bp3275893 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID640792076 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001328787 
Protein GI150398320 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGT CCACACTGCT GGTGGCCGCA ACCACCGCTT CGGTCCTTGC GCTTCCCGCA 
TCCGCAGCCG AGGTCAAGAA GATCGGCCTT GCTGTTCCGA ATCTTCAGGC CGACTTCTTC
AACCAGATCA AGCTCGGTGT CGAAAAGCAC GCCAGGGAAA AGGGCCTCGA AGTGGTGGTC
GTCGACGCGA AGAACGACAC CAACACGCAG GTCAGCCAGG TACAGGACCT GATGATCCAG
GACATCGACG CCTTCATCTA TATCCCGGCC GGTGCCGCGG CGGCTGCGGT CCCGACCCGC
CTTGCCCGCG AAGCCGGCAT TCCGGTCATC AACGTCGACC GCGTCCCGGA GGGTGCGCCG
GGCGACACCT TCATCGCCGG AGAGAGCGTC GAATCCGCCT ACGCCGTCTG CAAGTTCATC
ATCGAGAAGG CCGGCGGCTC GGGCAAGATG GCAATCATCC ACGGGCAGAA GGGCACAACG
CCGGAGGTCG ACCGCTTCAC CGGCTGCAAG CGCGCCATTG ACGAGAACAA GGGCGTCGAG
CTTATCGACC AGCAGTGGAG CAACATGTGG TCGGCCGATG AAGGCTTCTC GATCGCGCAG
AACATGCTGC AGGCAAATCC GGACATCACG ATCATTTTCG GCCAGGCCGA CGGTCTCGCC
ATGGGGGCGG CCAAGGCGGT CGACGTCGCC AATCTCTCCG ACAAGGTGAT CATCGGCGGC
TATGACGGCG ACGTCTCGGC GCTCGAATAC CTCGCCAGGT GCAAGGGCCC GTTCATCGCC
ACCGCAACGC AGAGCACGCA AAAAATGGGC GTTCTTGCCG TCGAATCCGC ACTTGCCGTT
GCGGCGGGCG AGAAGGTCGA AGAGCGTCAG ACGCCGAATG CCGTGCTGAC GACCTGCGAC
AACGCTCCGG AATTCGTAAA GAACCATCCG TAA
 
Protein sequence
MKLSTLLVAA TTASVLALPA SAAEVKKIGL AVPNLQADFF NQIKLGVEKH AREKGLEVVV 
VDAKNDTNTQ VSQVQDLMIQ DIDAFIYIPA GAAAAAVPTR LAREAGIPVI NVDRVPEGAP
GDTFIAGESV ESAYAVCKFI IEKAGGSGKM AIIHGQKGTT PEVDRFTGCK RAIDENKGVE
LIDQQWSNMW SADEGFSIAQ NMLQANPDIT IIFGQADGLA MGAAKAVDVA NLSDKVIIGG
YDGDVSALEY LARCKGPFIA TATQSTQKMG VLAVESALAV AAGEKVEERQ TPNAVLTTCD
NAPEFVKNHP