| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3072 |
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| Symbol | |
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| ID | 5323951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3220102 |
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| End bp | 3220689 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792022 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001328733 |
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| Protein GI | 150398266 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGAC TATTCACCGC CCTCGAAATT CCGCGCAATG CAGCAATGAG TCTTTCCTTG
CTGCGCGGAG GTCTTCCCGG AGCTCGCTGG ATCGATGTGG AGAATTATCA CATCACGCTC
CGCTTCATCG GCGACGTAGA CTGGCGTACC GCCGATGAAA TCATCGACAG ACTTGACCGC
ATCGAACGGC CCGAGTTTCA GCTGCAGCTG TCGGGCACCG GCGCCTTCGG CTCCAAGAAG
CCGCATTCCG TCTGGGCCGG CGTCAGTGCC GTTCCCGAGA TGTTCGCCCT GCAGGCGGAA
ATCGAACGCA TCTGCCAGCG CATAGGGCTG CCCTCGGATC CACGCAAGTT CACCCCGCAT
GTGACGCTGG CGCGCCTGCG CTCATCGCGC GTCGAGGACG TGGTCGAATA CCTCTCCGGG
CGTGGCAATT TCGTCACTGC TCCATTCACC GTTTCGCGCT TCGTGCTTCT ATCGTCACGC
GATTCGGTCG GCGGTGGTCC GTATCTCACG GAAGAGGTCT TTCCGCTTCA CGAAGAGCGC
TCGAGCCTCT CGAGTACCGA CAAACATCCG GCTTCCAGCG CCTGGTAG
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| Protein sequence | MPRLFTALEI PRNAAMSLSL LRGGLPGARW IDVENYHITL RFIGDVDWRT ADEIIDRLDR
IERPEFQLQL SGTGAFGSKK PHSVWAGVSA VPEMFALQAE IERICQRIGL PSDPRKFTPH
VTLARLRSSR VEDVVEYLSG RGNFVTAPFT VSRFVLLSSR DSVGGGPYLT EEVFPLHEER
SSLSSTDKHP ASSAW
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