Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3065 |
Symbol | |
ID | 5323944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3213677 |
End bp | 3214471 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792015 |
Product | ABC transporter related |
Protein accession | YP_001328726 |
Protein GI | 150398259 |
COG category | [R] General function prediction only |
COG ID | [COG1101] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACG TCGAAAACAT CCAGGTCGTC TTCGGCAAGG GCACTCCGCT CCAGAAGCAG GCGCTGAACG GCGTCAGCCT GATCATCGAG GAAGGCTCCT TCGTCACGGT CATCGGTTCC AATGGCGCCG GCAAGTCCAC GCTTCTCGGG GTTCTTGCCG GCGATGTGCT GCCGAGCGGC GGCCGGGTCA CGATCGGCAC GACGGATGTG ACACGCAAGA GCACCGCATC GCGCGCGGGG CTTGTGGCGC GCGTCTTTCA GGATCCGCTT GCCGGCAGTT GCGGTGCGCT CTCGATCGAG GAGAACCTTG CGCTCGCCGC CAGGCGAGGA GAAAGCCGCG GCCTTACGCC GGCGCTCGGC TCGAAGCGCC GCGAGCATTT CCGCGAGCGT ATAGCCGATC TCAATCTGGG CCTCGAAAAC CGCATGGGCG ACCGCATGGA CCTGCTTTCG GGCGGCCAGC GACAGGCGGT ATCGCTGGTG ATGGCGACGC TCGCCGGCTC CGAGGTGCTG CTGCTCGACG AGCACACGGC CGCGCTCGAT CCCGGCATGG CCGAGTTCAT CATGAACCTT ACGCAAAAGA TCGTTTCCGA GCGCAAGCTC ACTACGCTGA TGGTAACGCA CTCGATGCGC CAGGCGCTCG ATTTCGGCCA TCGCACCGTC ATGCTCCACG GCGGCGAGAT CGTGCTCGAC GTCGCCGGCG ACAGCCGCAA GACGCTCGAG GTCGAGGACC TCATTGCCAT GTTCCGCCGC ATCCGCGGTC AGACGTTGGA CGATGATGCT CTGTTGATCG GGTGA
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Protein sequence | MINVENIQVV FGKGTPLQKQ ALNGVSLIIE EGSFVTVIGS NGAGKSTLLG VLAGDVLPSG GRVTIGTTDV TRKSTASRAG LVARVFQDPL AGSCGALSIE ENLALAARRG ESRGLTPALG SKRREHFRER IADLNLGLEN RMGDRMDLLS GGQRQAVSLV MATLAGSEVL LLDEHTAALD PGMAEFIMNL TQKIVSERKL TTLMVTHSMR QALDFGHRTV MLHGGEIVLD VAGDSRKTLE VEDLIAMFRR IRGQTLDDDA LLIG
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