Gene Smed_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3065 
Symbol 
ID5323944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3213677 
End bp3214471 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID640792015 
ProductABC transporter related 
Protein accessionYP_001328726 
Protein GI150398259 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG TCGAAAACAT CCAGGTCGTC TTCGGCAAGG GCACTCCGCT CCAGAAGCAG 
GCGCTGAACG GCGTCAGCCT GATCATCGAG GAAGGCTCCT TCGTCACGGT CATCGGTTCC
AATGGCGCCG GCAAGTCCAC GCTTCTCGGG GTTCTTGCCG GCGATGTGCT GCCGAGCGGC
GGCCGGGTCA CGATCGGCAC GACGGATGTG ACACGCAAGA GCACCGCATC GCGCGCGGGG
CTTGTGGCGC GCGTCTTTCA GGATCCGCTT GCCGGCAGTT GCGGTGCGCT CTCGATCGAG
GAGAACCTTG CGCTCGCCGC CAGGCGAGGA GAAAGCCGCG GCCTTACGCC GGCGCTCGGC
TCGAAGCGCC GCGAGCATTT CCGCGAGCGT ATAGCCGATC TCAATCTGGG CCTCGAAAAC
CGCATGGGCG ACCGCATGGA CCTGCTTTCG GGCGGCCAGC GACAGGCGGT ATCGCTGGTG
ATGGCGACGC TCGCCGGCTC CGAGGTGCTG CTGCTCGACG AGCACACGGC CGCGCTCGAT
CCCGGCATGG CCGAGTTCAT CATGAACCTT ACGCAAAAGA TCGTTTCCGA GCGCAAGCTC
ACTACGCTGA TGGTAACGCA CTCGATGCGC CAGGCGCTCG ATTTCGGCCA TCGCACCGTC
ATGCTCCACG GCGGCGAGAT CGTGCTCGAC GTCGCCGGCG ACAGCCGCAA GACGCTCGAG
GTCGAGGACC TCATTGCCAT GTTCCGCCGC ATCCGCGGTC AGACGTTGGA CGATGATGCT
CTGTTGATCG GGTGA
 
Protein sequence
MINVENIQVV FGKGTPLQKQ ALNGVSLIIE EGSFVTVIGS NGAGKSTLLG VLAGDVLPSG 
GRVTIGTTDV TRKSTASRAG LVARVFQDPL AGSCGALSIE ENLALAARRG ESRGLTPALG
SKRREHFRER IADLNLGLEN RMGDRMDLLS GGQRQAVSLV MATLAGSEVL LLDEHTAALD
PGMAEFIMNL TQKIVSERKL TTLMVTHSMR QALDFGHRTV MLHGGEIVLD VAGDSRKTLE
VEDLIAMFRR IRGQTLDDDA LLIG