Gene Smed_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3055 
Symbol 
ID5323934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3205348 
End bp3205803 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content65% 
IMG OID640792005 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001328716 
Protein GI150398249 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.517471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCTCA ATGACGACAT TGCGCTCCTG TCCAATGTTT CGCTCTTCGC TGACATCGGC 
GAGGACAAGC TGAGGCTGAT CGCCTTCGGC GCCGAGCGCC GCCGGGTGGC AAAGGGCCAG
GAGCTTTTCC GCGAGGGCGC GCCGGCCGAT TGCGCCTATG CCGTCGCAGC CGGCAGCTTT
GTCCTCTCGA AGGCGGGCGC ACAGGGACGG CAGCAGCAGG TGATGACGGT CGGCCATGGT
GCGCTGCTGT CGGAACTGGC ACTCATCTCG ATGGTCGAGC GCAAGTTCAC CGCCACGGCG
CAGGAAGACA GCGAAGTGAT CCGCATCAAC CGCCCGCTCT TCCGTCGGAT GCTGGAGGAA
TATCCCGAAG TGACCGCCAT GGTCGAAGCC CGCATCCGGG AAAACATCCA GGCGATGATC
CGGCGCGTCG AGGCGCTTGC CGGGCGGTTT GCCTGA
 
Protein sequence
MALNDDIALL SNVSLFADIG EDKLRLIAFG AERRRVAKGQ ELFREGAPAD CAYAVAAGSF 
VLSKAGAQGR QQQVMTVGHG ALLSELALIS MVERKFTATA QEDSEVIRIN RPLFRRMLEE
YPEVTAMVEA RIRENIQAMI RRVEALAGRF A