| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3033 |
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| Symbol | |
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| ID | 5323911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3181778 |
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| End bp | 3182533 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791982 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001328694 |
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| Protein GI | 150398227 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.612185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTT CCAACCGTAC CGCGCTCGTA ACCGGCGCAA GCCGCGGCAT CGGCCGTGCT
ATCGCCATCG GTCTCGCCGA GCGCGGCTAT GACGTCGCCA TCAACGATAT TGAGCGGCAG
AAGGATGTTC TCGCCGGTGT GGCGACGGAG ATAGAAGAGC TCGGGCGGCG CGTCATAACC
GTTTGCGCCG ATGTCAGCAG CAAGGCCGAG GTGAGGGCAA TGGCAAAAGC CGTCGGTGAT
GCCTTCGGCC ATCTCGATGC GGTGGTCAAC AATGCCGGAA TACTGATTTC AGGTGATGTC
GAAGGCCTCG ACGAAGAACA CTGGGACAGT GTCATGGATG TGAACGCCAA GGGAACCTTC
CTGGTCGTCC AGGCCGTTCT GCCGATGATG AAAGCGCGCA GATATGGACG CATCGTCAAC
ATCGCCTCGA TCGGCGGCAA GCATGGTGCA CCCGAACAGG CCCATTATTC CGCGTCGAAG
GCTGCAGTGA TGGGTTTCAC GCGCGTTCTG GCACAGGAAG TGGGCGTTGA CGGGATCACT
GCCAACTGCG TGTGCCCCGG GATCATTCTC ACGGATATGG GGCGCGTCAA TCTCGACGAT
CCGGCTGTGA AGAAGAGCTG GCAGGACAAA ACCGCCATGC GTCGCATCGG CGATCCCGAG
GATGTCGTCG GTGCGGTTGC CTTCTTTGCT TCCGATGATG CGGCTTTCGT GACCGGCCAG
ACGCTGAATG TGGACGGCGG CATCGTGCTG AGCTGA
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| Protein sequence | MTASNRTALV TGASRGIGRA IAIGLAERGY DVAINDIERQ KDVLAGVATE IEELGRRVIT
VCADVSSKAE VRAMAKAVGD AFGHLDAVVN NAGILISGDV EGLDEEHWDS VMDVNAKGTF
LVVQAVLPMM KARRYGRIVN IASIGGKHGA PEQAHYSASK AAVMGFTRVL AQEVGVDGIT
ANCVCPGIIL TDMGRVNLDD PAVKKSWQDK TAMRRIGDPE DVVGAVAFFA SDDAAFVTGQ
TLNVDGGIVL S
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