Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3030 |
Symbol | |
ID | 5323908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3178464 |
End bp | 3179435 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640791980 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_001328692 |
Protein GI | 150398225 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.436733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTCGC CGCCGGTTTT TTTGTATTTG ATCGAGTGGA CACCCATGCC CATCAAGATA CCCGATACGC TGCCCGCCTT CGAAACCCTC GTACACGAGG GCGTGCGGCT GATGACCGAA ACAGAGGCGA TCCGCCAGGA CATCCGGCCG CTGCAGATCG GGCTCTTGAA CCTCATGCCG AACAAGATCA AGACCGAGGT CCAGATGGCG CGGCTGATCG GCGCCACGCC GCTGCAGGTC GAACTGACGC TGGTGCGTGT CAACGGCCAC CGGCCGAAAA ATACGCCCGA AGAACATCTG CTCGCCTTCT ACGAGACCTT TGAAGAAGTC GAGGCCCGCA AGTTCGACGG CTTCATCATC ACCGGCGCGC CCGTCGAGAC GCTCGAATAT GAAGAGGTCA CCTACTGGAA GGAACTGCAG CGGATCTTCG ACTGGACGAC GACCAACGTG CATTCGACGC TGAACGTCTG CTGGGGCGCG ATGGCTGCCA TTTACCATTT TCACGGCATT CCGAAATATC CGCTGAAGGA GAAGGCATTC GGCGTCTACC GCCACCAGAA CCTCAAGCCC TCCTCGGTCT ATCTGAACGG CTTCTCCGAC GATTTCGCCG TGCCCGTTTC GCGCTGGACC GAAGTGCGCC GCGCCGATAT AGATCGGGTG CCGGATCTCG AAATCCTGAT GGAATCCAAG GAGATGGGCG TCTGCCTCGT GCACGAGAAG AAAGGCAACC GGCTTTATAT GTTCAACCAC GTCGAATATG ATTCAACGTC GCTGTCAGAG GAATATTTCC GCGACGTCGA TGCCGGCGTG CCGATCAAGC TGCCGCACGA CTATTTCCCG CACAACGACT CCGCCCTTCC CCCGCAGAAC CGCTGGCGCA GCCACGCACA TCTCTTCTTC GGCAATTGGA TCAACGAGAT CTACCAGACG ACGCCCTACG AACCGGCGAA AATCGGAGCC GGAGCGTATT GA
|
Protein sequence | MVSPPVFLYL IEWTPMPIKI PDTLPAFETL VHEGVRLMTE TEAIRQDIRP LQIGLLNLMP NKIKTEVQMA RLIGATPLQV ELTLVRVNGH RPKNTPEEHL LAFYETFEEV EARKFDGFII TGAPVETLEY EEVTYWKELQ RIFDWTTTNV HSTLNVCWGA MAAIYHFHGI PKYPLKEKAF GVYRHQNLKP SSVYLNGFSD DFAVPVSRWT EVRRADIDRV PDLEILMESK EMGVCLVHEK KGNRLYMFNH VEYDSTSLSE EYFRDVDAGV PIKLPHDYFP HNDSALPPQN RWRSHAHLFF GNWINEIYQT TPYEPAKIGA GAY
|
| |