Gene Smed_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3013 
Symbol 
ID5323891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3161588 
End bp3162088 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID640791963 
Productiojap-like protein 
Protein accessionYP_001328675 
Protein GI150398208 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0357309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.915296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTGA TGCCTACATT TAGGTACGGT TCGAAGAAAT ATTTCGAATC GAACGTGCCT 
GTTCTGTTCA CTTGGAAAGG AAAAACCCTG ACAACAGCAC ACGCCAAGGG ATATGCGGTC
TCCGCGATCC CGCGCAGCAC GGAATCGAGC GACGAAGCCG CTGTCCGTGC GCTTCAACTG
GTCCTCGAAA GCCTAGAGGA CTCGAAGGCA GAAAATATCG TCACCATCGA CATTGCCGGG
AAATCGGCGC TGGGAGACTT CATGGTCGTT GTCTCCGGGC GATCGAACAG GCATGTGATG
GCCATTGCCG ATCACCTGAT CACGGACCTG AAGGACGACG GCCTCGGCAG GGCTCGCGTC
GAGGGACTTG AGAGCGGTGA CTGGGTACTG ATCGACGCCG GCGACGTGAT CGTTCATATC
TTCCGGCCGG AGATCCGGGA GTTCTACAAC ATCGAAAAGA TGTGGGCGGC TCCCGACGTC
GAAGACGGTA CCCTGCACTG A
 
Protein sequence
MGLMPTFRYG SKKYFESNVP VLFTWKGKTL TTAHAKGYAV SAIPRSTESS DEAAVRALQL 
VLESLEDSKA ENIVTIDIAG KSALGDFMVV VSGRSNRHVM AIADHLITDL KDDGLGRARV
EGLESGDWVL IDAGDVIVHI FRPEIREFYN IEKMWAAPDV EDGTLH