| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2995 |
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| Symbol | |
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| ID | 5323872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3144485 |
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| End bp | 3146857 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791946 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_001328659 |
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| Protein GI | 150398192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.836339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCT ACTGGCGGGC TTCCAACTAT CTCTCGGTCG GCCAGATATA CCTGCTCGAC
AATCCGCTAT TGCGGGAATC CCTGAAGCGC GAGCACATCA AGCCGCGACT GCTCGGCCAC
TGGGGGACGT CGCCCGGTCT CAACATGCTC TATGTGCATC TGAACCGGGT CATCAAGCGC
GACGATCTCA ACATGATCTA CGTCATCGGC CCCGGCCACG GCGGACCGTC ATTGGTGGCG
CACGCTTATC TCGAAGGCAC CTACAGCGAG TTCTATCCGA ATATCAGCGA GGATACGGAA
GGGATGAAGC GACTGTTCAA GCAGTTCAGC TTCCCCGGCG GCATACCGAG CCATGTCGCG
CCCGAAACTC CCGGCAGCAT CCACGAGGGC GGCGAACTCG GATACGCGCT CAGCCATGCC
TATGGCGCGG CATTCGACAA TCCCGATCTG ATCGTCGCCT GCGTCGTTGG CGATGGGGAA
GCTGAGACCG GTCCGCTCGC GACCGGCTGG CAAAGCAACA AATTCCTCAA TCCCGCCCGC
GACGGCTGTG TGCTGCCGAT CCTTCACCTG AACGGCTATA AGATTGCCAA CCCCTGCTTC
CTCGCCCGCA TCCCCGAGGA GGAACTGCGC AAGTTCTTCG AGGGGATGGG ATACAGGCCC
TATTTCGTCG AGGGCCGTGA TCCCGAGGAT GTTCACCAGA AGCTCGCAGG CGTGCTCGAC
ACCGCGGTCG GCGAGATCAA GGAAATCTGG GCCGATGCCC GTACGAACGG CAATCTCAAG
CGCCCGGCAT GGCCGATGAT CGTCTTTCGG ACGCCAAAGG GCTGGACGTG CCCGCCGGAG
ATCGATGGCA AGAAATGCGA GGACTATTGG CGATCGCATC AGGTGCCCAT GGGCGAGATG
GACAAGCCGG AGCATATCCG CATTCTCGAA CAATGGATGA AAAGCTATCG GCCCGAGGAG
CTTTTCGACG AGACCGGCCG GCTCACGGCT GAAATTGCAT CGCTCGCTCC GGCGGGCCAC
CGCCGGATGA GCGACAACCC CCACGCCAAC GGCGGGTTGC TTCTGCGTGA TTTGAAGATG
CCTGATTTCA GGGAATACGC CGTGGAGGTA ACCAGCCCTG GCGCGACTAT GGCCGAGTCA
GCCCGCGCGA TGGGCAAGTT CCTGCGCGAC GTGATGAAGG CAAACCTGGA GAGCAAGAAC
TTCCGGCTGT TCAGTCCGGA CGAGAACAAC TCCAACCGCT GGCAGGATGT GCTCGAGGTG
ACCGATCGCT GCTACATGGC GGATATCTAT CCGGAGGACG ACCATCTCTC GCCGGACGGC
CGCATCATGG AAGTATTGAG CGAGCACCAG TGCCAGGGAT GGCTGGAGGG CTATCTGCTG
ACAGGCCGCC ACGGCTTCTT CTCCTGCTAC GAAGCCTTCA TCCACATCAT CGACTCGATG
TTCAACCAGC ATGCCAAGTG GCTCAAGGTG TGTGGCGAAA TCCCGTGGCG CAGACCCATC
GGCTCACTGA ACTATTTCCT CAGTTCGCAT GTCTGGCGAC AGGATCACAA CGGCTTCAGC
CATCAGGACC CCGGCTTCAT CGACCATGTC GTCAATAAAA AGGCGGACGT GATCCGCGTC
TATCTGCCGC CGGACGCCAA CACCCTGCTC TGCGTCACGG ACCACTGCCT GCGCAGCCGC
GACTATGTCA ACGTGGTCGT CGCCGGAAAA CAGCCTGCGC CGCAATGGCT GACGATGAGC
GAGGCCGTCA GGCACTGCGC CATGGGCCTC AGCATCTGGG ATTGGGCGAG CAGCGACAAG
GGCAGCGAGC CCGATGTCGT CATGGCCTGT TGCGGCGACG TCCCGACCCT CGAAACGCTT
GCGGCGGTGC AACTGCTCCG CGAACACCTG CCCGAGCTGA AGGTGCGGGT TGTCAATGTC
GTCAACCTGA TGAAGCTGCA ACCTGCGGAG GAGCATCCGC ACGGGCTATC GGACCGTGAT
TTCGACGCCT TCTTCACAAG AGACAAGCCG ATCATCTTCG CCTTCCACGG TTATCCGTGG
CTGATCCACC GATTTACCTA TCGCAGAAAA AATCACGGCA ACCTGCACGT GCGCGGCTAC
AAGGAGGAAG GCACGACGAC CACCCCGTTC GACATGGTGG TCCTGAACGA GCTCGACCGG
TTCCACCTCG TCGAGGACGT TATCGATCGG CTGCCGCAAC TCGGCGCCCG TGCCGCCTAT
TTCAAGCAGG CAATTCACGA GAAGCTGATC GAGCATCGCG AATATATCGA GAAGCATGGC
GACGACATGC TTGCGATCAG CGGCTGGAAG TGGGGCGTGA AAGACACGAC GGCAGCGTCC
CGGAAAACCT CTACGGAAGG GGACAACGTC TGA
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| Protein sequence | MDAYWRASNY LSVGQIYLLD NPLLRESLKR EHIKPRLLGH WGTSPGLNML YVHLNRVIKR
DDLNMIYVIG PGHGGPSLVA HAYLEGTYSE FYPNISEDTE GMKRLFKQFS FPGGIPSHVA
PETPGSIHEG GELGYALSHA YGAAFDNPDL IVACVVGDGE AETGPLATGW QSNKFLNPAR
DGCVLPILHL NGYKIANPCF LARIPEEELR KFFEGMGYRP YFVEGRDPED VHQKLAGVLD
TAVGEIKEIW ADARTNGNLK RPAWPMIVFR TPKGWTCPPE IDGKKCEDYW RSHQVPMGEM
DKPEHIRILE QWMKSYRPEE LFDETGRLTA EIASLAPAGH RRMSDNPHAN GGLLLRDLKM
PDFREYAVEV TSPGATMAES ARAMGKFLRD VMKANLESKN FRLFSPDENN SNRWQDVLEV
TDRCYMADIY PEDDHLSPDG RIMEVLSEHQ CQGWLEGYLL TGRHGFFSCY EAFIHIIDSM
FNQHAKWLKV CGEIPWRRPI GSLNYFLSSH VWRQDHNGFS HQDPGFIDHV VNKKADVIRV
YLPPDANTLL CVTDHCLRSR DYVNVVVAGK QPAPQWLTMS EAVRHCAMGL SIWDWASSDK
GSEPDVVMAC CGDVPTLETL AAVQLLREHL PELKVRVVNV VNLMKLQPAE EHPHGLSDRD
FDAFFTRDKP IIFAFHGYPW LIHRFTYRRK NHGNLHVRGY KEEGTTTTPF DMVVLNELDR
FHLVEDVIDR LPQLGARAAY FKQAIHEKLI EHREYIEKHG DDMLAISGWK WGVKDTTAAS
RKTSTEGDNV
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