Gene Smed_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2962 
Symbol 
ID5323839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3109457 
End bp3109888 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content60% 
IMG OID640791913 
Producthypothetical protein 
Protein accessionYP_001328626 
Protein GI150398159 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.481941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCT GGCTCTACAA ATCCGAACCG GCCAAATGGT CATGGCAGAT GCAGAAGGAT 
GCCGGCGAGA AGGGCACTGA ATGGACCGGC GTTCGCAATT ACCTGGCGCG CAACAACATG
CGGGCGATGA AGATCGGCGA CAAAGGTTTC TTCTATCACT CCAACGAGGG GCTTGAGGTC
GTCGGCATCA CCGAGGTCTG CGCGCTTTCG CATCCGGACA CGACAGCCGA GGGTGACGCG
CGCTGGGACT GCGTCGACAT TCGCGCCGTT ATGGACATGC CGAGACCCGT GACCTTGAAG
GAGATCAAGG AAAACCCGAG GCTCGCGACG ATGTCGCTCG TCACCTCGAT GCGCCTTTCG
GTACAGCCGG TAACCGAGGA CGAGTGGGTA GAGGTCTGCC GCATGGGCGG CCTCGATACT
TCGCCCCGTT GA
 
Protein sequence
MAFWLYKSEP AKWSWQMQKD AGEKGTEWTG VRNYLARNNM RAMKIGDKGF FYHSNEGLEV 
VGITEVCALS HPDTTAEGDA RWDCVDIRAV MDMPRPVTLK EIKENPRLAT MSLVTSMRLS
VQPVTEDEWV EVCRMGGLDT SPR