| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2950 |
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| Symbol | |
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| ID | 5323827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3098606 |
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| End bp | 3099913 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791901 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328614 |
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| Protein GI | 150398147 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.110397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGT TTGAACGCGG GTTGGCGTCC ATGCACGCCG CTAAACTAAC GGCGCTTGCC
GCAGCCGCCG GCATGACGCT TCTCTTCGGT CCCGAAACGG CATCGGCCGA AACCGTCGTA
AAATGGCTGC ATCTGGAGAC GGTTCCCGCC TATCTGAAGC AATGGGAGGA CATCGCCGCC
AAGTACGAAA CCGAACATCC CGGCGTGGAT GTTCAGCTCC AATTCCTGGA AAACGAGGCT
TTCAAGGCGA AGTTGCCGAC GCTGCTGCAA TCGGACGACG CTCCCCATTT CTTCTACAGC
TGGGGCGGCG GAGTGCTGAA GCAGCAGGCC GAGACCGGCG CACTCAAGGA CCTGACGGAA
GCAATGCGTG CCGATGGCGG CGCCTGGGAG AAGAGCTACA ACCCGGCGGC AGTCAAGGGC
TTCACCTTTG AGGATCGAAT TTATGCGGTT CCCTTCAAAA TGGGAACGAT CAGCTTCTTC
TACAATAAGG AGCTGTTCCA GAAGGGCGGC GTCAAGGCCG AGGACATCAA GAGCTGGGAT
GATTTCCTCA CAGCGGTGAA AACGCTGAAG GAGGCCGGGA TCACGCCGAT CGCCGGCGGC
GGCGGGGACA AATGGCCGCT GCACTTCTAC TGGAGCTATC TCGTGATGCG CAATGGCGGC
CAGCAGGTAT TCGAGGATGC CAAGAACAAC GAGGGCGAGG GTTTCTTGCA CCCGGCGATC
CTAAAGGCCG GTGAACAACT CGCCGAACTC GGCAAGCTCG AGCCGTTCCA GGGCGGCTAT
CTCGGGGCGA ACTGGCCGCA AACGCTCGGC CTGTTCGGTG ACGGCAAGGC GGCGATGATC
CTGAGCTTCG AAACCACCGA AGCCACCCAG CGCGCCAATT CCGGCGACGG CAAGGGCCTG
GCACCCGAGA ACATCGGTCG CTTCCCCTTC CCGGCCGTCG AGGGCGGGGC AGGTGCGGCG
ACCGATACGC TCGGAGGCCT CAACGGCTGG GCGGTAACCA AGAATGCCCC GCCTGAGGCG
CTCGATTTCC TGCGCTATCT CACCAATGCT GAGAACGAGA GGCTTATGGC AAGTACCGGC
ATGATCGTAC CGGTGGCCGT GGGCGCGGAA GAGGGCATCA CCAACCCGCT GGTGCGTGCT
TCGGCCGACC AGCTTGCGGC CTCGACATGG CACCAGAACT ATTTCGACCA GGATCTCGGC
CCCTCGGTCG GCCGCGTCGT GAACGACGCA TCCGTCGAGA TCCTCTCCGG GCAGATGTCC
TCCGAGGAGG GAGCCCGGAT GATCCAGGAC GCACGCGAGC TGGAATGA
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| Protein sequence | MMMFERGLAS MHAAKLTALA AAAGMTLLFG PETASAETVV KWLHLETVPA YLKQWEDIAA
KYETEHPGVD VQLQFLENEA FKAKLPTLLQ SDDAPHFFYS WGGGVLKQQA ETGALKDLTE
AMRADGGAWE KSYNPAAVKG FTFEDRIYAV PFKMGTISFF YNKELFQKGG VKAEDIKSWD
DFLTAVKTLK EAGITPIAGG GGDKWPLHFY WSYLVMRNGG QQVFEDAKNN EGEGFLHPAI
LKAGEQLAEL GKLEPFQGGY LGANWPQTLG LFGDGKAAMI LSFETTEATQ RANSGDGKGL
APENIGRFPF PAVEGGAGAA TDTLGGLNGW AVTKNAPPEA LDFLRYLTNA ENERLMASTG
MIVPVAVGAE EGITNPLVRA SADQLAASTW HQNYFDQDLG PSVGRVVNDA SVEILSGQMS
SEEGARMIQD ARELE
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