Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2936 |
Symbol | |
ID | 5323813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3082285 |
End bp | 3083691 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791887 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001328600 |
Protein GI | 150398133 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTATG ATCTCATCGT TATCGGAAGC GGCCCCGGCG GCTATGTCTG CGCCATCAAG GCGGCGCAGC TGGGCATGAA GGTTGCCGTG GTCGAGAAGC GCAGCACCTA TGGCGGTACC TGCCTGAATG TAGGCTGCAT CCCCTCCAAG GCGCTGCTGC ATGCTTCCGA AATGTTCCAT GTCGCCGAGC ACGGGCTTGA CGCCCTGGGC GTCGAGGTCG CAACCCCGAA GCTCAACCTT CAGAAGATGA TGGCGCACAA GGACGCGACC GTTAAGTCCA ACGTCGACGG AGTCGCCTTC CTCTTCAAGA AGAACAAGAT CGACGGATTT CAGGGCCTGG GCAAAGTCCT CGGCCAGGGC AAGGTTGCCG TTGCGAACGA GAAGGGCGAG GAGCAGGTGC TCGAGGCGAA GAATGTCGTT ATCGCCACCG GTTCGGACGT CGCCGGCATT CCCGGGGTAG AGGTCCCTTT CGATGAAAAG ATCATCGTCT CCTCGACCGG GGCGCTCGCG CTCGAAAAGG TCCCCGCGAG CATGATCGTC GTCGGCGGCG GCGTCATCGG TCTCGAGCTC GGCTCGGTCT GGGCGCGCCT CGGCGCCAAG GTGACGGTGG TCGAATATCT CGACACCATT CTCGGTGGCA TGGACGGCGA AGTCGCCAAG CAGCTCCAGC GGATGCTGAC GAAACAGGGC CTCGACTTCA AGCTCGGCGC AAAAGTCACC GGAGTGGTGA AGTCTGACGA GGGTGCGAAG GTCACCTTCG AGCCGGTGAA GGGCGGCGAG GCGACGACGC TCGATGCCGA AGTCGTGCTC ATCGCTACCG GCCGCAAGCC CTCCACGGAA GGTTTGGGCC TCGCCAAGGC GGGCGTCGTT CTCGATCAGC GTGGCCGCGT CGAGATCGAC CAGCACTTTC AGACGAGCAT CACCGGCGTC TACGCGATCG GTGATGTCGT GCGCGGTCCG ATGCTGGCCC ACAAGGCCGA GGATGAAGGC ATCGCCGTCG CGGAGATCAT CGCCGGCCAG GCCGGCCACG TGAACTACGA CGTCATCCCG GGTGTGGTCT ATACCCAGCC CGAGGTTGCC TCCGTCGGCA GGACCGAGGA AGAGCTGAAG GCCGCAGGCG TTGCCTATAA GGTCGGAAAA TTCCCCTTTA CCGCCAACGG CCGCGCCCGC GCCATGCTGC AAACGGACGG TTTCGCGAAG ATCCTGGCGG ACAAGGAGAC CGACCGCGTC CTTGGCGGCC ACATCATCGG CTTCGGCGCC GGAGAGATGA TTCACGAGAT CGCCGTGCTG ATGGAATTCG GCGGATCGTC CGAAGACCTC GGCCGCACCT GCCACGCCCA TCCGACCATG TCGGAAGCGG TGAAGGAAGC GGCGCTTTCC ACCTTCTTCA AGCCGATCCA TATGTGA
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Protein sequence | MAYDLIVIGS GPGGYVCAIK AAQLGMKVAV VEKRSTYGGT CLNVGCIPSK ALLHASEMFH VAEHGLDALG VEVATPKLNL QKMMAHKDAT VKSNVDGVAF LFKKNKIDGF QGLGKVLGQG KVAVANEKGE EQVLEAKNVV IATGSDVAGI PGVEVPFDEK IIVSSTGALA LEKVPASMIV VGGGVIGLEL GSVWARLGAK VTVVEYLDTI LGGMDGEVAK QLQRMLTKQG LDFKLGAKVT GVVKSDEGAK VTFEPVKGGE ATTLDAEVVL IATGRKPSTE GLGLAKAGVV LDQRGRVEID QHFQTSITGV YAIGDVVRGP MLAHKAEDEG IAVAEIIAGQ AGHVNYDVIP GVVYTQPEVA SVGRTEEELK AAGVAYKVGK FPFTANGRAR AMLQTDGFAK ILADKETDRV LGGHIIGFGA GEMIHEIAVL MEFGGSSEDL GRTCHAHPTM SEAVKEAALS TFFKPIHM
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