Gene Smed_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2913 
Symbol 
ID5323790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3058500 
End bp3058928 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID640791864 
Productferric uptake regulator family protein 
Protein accessionYP_001328577 
Protein GI150398110 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA GCAAGAATCG GGTCGAGGAA CTGGAAGGAA TTCTGCGGGA TGGCGGCGTG 
CGCGTCACCC GTCAGCGCGC CGCAATTCTG AAGATCCTGG CCGAGGCAGA GGACCATCCG
GATGCCAGCG AGCTGCACCG GCGGGCCAAG GAAATCGACG CGACCGTCTC GCTCTCGACG
GTCTACCGGA CGCTTTCGGC GCTGGAGCAA CAAGGGGTAG TGCAGCGGCA TGCTTTCGAG
AATGCGACGG CCCGCTTCGA GACGGCGGAC GCGCCGCATC ACGATCACCT GATCGACATA
GAAACGGGTG CGGTGATCGA ATTCCGCTCC GACAAGATCG AGCAGCTGCA GGCCGAAATT
GCCGCCGAAC TCGGATACGA TCTTGTGCGC CACCGGCTGG AACTCTATTG CCGGAAGCGC
AAGGATTGA
 
Protein sequence
MKQSKNRVEE LEGILRDGGV RVTRQRAAIL KILAEAEDHP DASELHRRAK EIDATVSLST 
VYRTLSALEQ QGVVQRHAFE NATARFETAD APHHDHLIDI ETGAVIEFRS DKIEQLQAEI
AAELGYDLVR HRLELYCRKR KD