| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2897 |
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| Symbol | |
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| ID | 5323774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3038395 |
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| End bp | 3041274 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791849 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001328562 |
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| Protein GI | 150398095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.30865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCA TTCATGAAAT CGACTACGGC ACTCCTGCTT CCAAATCCGA AAAGCTGGTG
ACGCTGACGA TCGACGGACG CGAGATCACC GTGCCGGAAG GCACCTCGAT CATGCGCGCG
GCAATGGAAG CGGGCATCGA GGTGCCGAAG CTTTGCGCTT CCGACATGAT GGATGCCTTC
GGCTCCTGCC GGCTCTGTCT CGTCGAAATC GATGGGCGCG CTGGGATGCC GGCCTCCTGC
ACGACGCCGG TTTCGGCAGG CATCAGCGTT TCGACGCAGA CACAGCGGCT GAAGGATGTC
CGCCGCGGCG TCATGGAACT CTATATTTCC GACCATCCGC TCGACTGCCT TACCTGCGCA
GCCAACGGCG ATTGCGAGCT GCAGGATATG GCTGGCGCCG TGGGCCTGCG CGATGTGCGC
TACGGCTATG ACGGCGAGAA CCATGTGACG GCGCGCAACA ATGGCGAAAT CAACGCCAAA
TGGATGCCGA AGGACGAATC GAACCCCTAT TTCACCTATG ATCCGGCGAA GTGCATCGTC
TGCTCGCGCT GCGTGCGGGC GTGCGAGGAA GTGCAGGGAA CTTTCGCGCT GACGATCAGC
GGCCGTGGCT TCGATTCACG CGTATCGGCC GGCATGAACG AGGACTTCGT CTCCTCCGAA
TGCGTTTCCT GCGGCGCCTG CGTTCAGGCC TGCCCGACCG CGACGCTGAC GGAAAAATCG
GTGATAGAAA TCGGCCAGCC CGAGCATTCT GTCGTCACCA CCTGCGCCTA TTGCGGCGTC
GGCTGCTCCT TCAAGGCGGA GATGCGCGGC GAGGAGCTGG TGCGCATGGT GCCATGGAAG
GACGGGCAGG CGAACCGCGG CCATTCCTGC GTAAAGGGCC GCTTTGCCTA TGGTTATTCC
AACCACAAGG ACCGCATTCT CAATCCGATG ATCCGCGAGA AGGTCACCGA TGCCTGGCGC
GAGGTCACCT GGGAGGAAGC TTTCGCCCAT GTCGCCTCCG AGTTCCGCCG GATCCAGTAC
CAGTACGGCC GTGATTCCGT CGGCGGCATC ACGTCTTCGC GCTGCACCAA TGAGGAGACC
TTTCTGGTGC AGAAGCTGGT GCGCGCCGGT TTCGGCAACA ACAATGTCGA CACCTGCGCC
CGCGTCTGCC ATTCGCCGAC CGGCTACGGC CTCAACCAGA CCTTCGGCAC CTCCGCCGGC
ACGCAGGATT TCGACAGCGT GGAGCACACG GATGTTGCGG TCATCATCGG TGCCAACCCG
ACCGACGGTC ATCCGGTCTT CGCCTCGCGG CTGAAGAAGC GGCTGCGCCA GGGCGCCAAG
CTGATCGTCA TCGATCCGCG CCGGATCGAC CTCGTCCGCT CGGCCCATGT CGAAGCGTCC
TACCATCTGC CGCTGAAGCC AGGTACCAAC GTCGCCATCC TGACCGCGCT GGCGCATGTC
ATCGTCACCG AGGGTATTGG TAACGAAGCC TTCATCCGCG AGCGCTGCGA CTGGTCGGAA
TTCGAGGACT GGGCAGCCTT CGTCGCCGAG CCGCATCACA GCCCGGAAGC GACCGCGGCC
TATACCGGCG TTCGGGCCGA TCTGGTGCGC GGAGCCGCGC GGCTTTACGC GACCGGCGGC
AATGGCGCGA TCTATTACGG CCTTGGCGTC ACCGAGCACA GCCAGGGCTC GACGACAGTG
ATGGCGATCG CGAACCTCGC CATGCTCACC GGCAACATCG GCCGGCCGGG CGTTGGCGTC
AATCCGCTGC GCGGCCAGAA CAACGTCCAG GGCTCCTGCG ACATGGGCTC CTTCCCACAT
GAGCTTCCCG GCTACCGGCA TATTTCGGAC GATGCAACGC GCGAGATCTT CGAAAAGCTC
TGGGGCGTGA AGCTCAACCA CGAGCCGGGA CTGCGCATTC CCAACATGCT CGACGCCGCC
GTCGAGGGCA CCTTCAAGGG CCTGTACGTC CAGGGGGAGG ACATTCTGCA GTCGGACCCC
GACACGAAGC ACGTCGCGGC CGGCCTTGCC GCCATGGAGT GCGTCGTGGT GCACGACCTC
TTCCTCAACG AGACGGCGAA CTACGCTCAT GTCTTCCTGC CGGGCTCGAC CTTCTTCGAA
AAGGACGGAA CCTTCACCAA TGCCGAGCGC CGCATCAACC GCGTCCGGCG CGTCATGCGG
CCGAAGAACG GCTATGCCGA TTGGGAGGTG ACGCAGAAGA TGGCGCAAGC CATGGGGCTT
GCCTGGAATT ACCGTCATCC GTCCGAGATC ATGGACGAGA TCGCCGCTAC GACGCCGAGC
TTTGCCATGG TCTCCTACGA CTATCTGGAC AAGATGGGCT CGGTGCAGTG GCCGTGCAAC
GAAAAGGCGC CGCTCGGCTC GCCGATCATG CATGTGGACG GTTTCGTACG CGGCAAGGGC
AAGTTCATCC GCACCGAATA TGTGGCGACC GACGAGAGAA CCGGCCCCCG CTTCCCGCTG
CTTCTGACGA CCGGCCGTAT TCTCAGCCAG TACAATGTCG GTGCCCAGAC GCGGCGCACG
GAGAACGTCG TCTGGCATGC GGAAGACCGG CTGGAAATCC ATCCGCACGA CGCCGAGCAG
CGCGGCATTC GCGACGGCGA CTGGGTCAGG CTCGCCAGCC GCTCGGGCGA CACGACGCTC
CGCGCGCTGA TCACCGACCG AGTCGCACCT GGCGTCGTCT ATACGACCTT CCATCACCCC
TCGACGCAGG CGAACGTGAT CACCACCGAC TTTACCGACT GGGCGACCAA CTGCCCGGAA
TACAAGGTGA CGGCGGTGCA GGTCTCGCCG TCGAACGGCC CCTCCGACTG GCAGCGTGAT
TATGATGAGC AGGCGCGCCA GTCGCGTCGC ATCGCCGGCA AGCTGGAGGC GGCGGAATAG
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| Protein sequence | MSLIHEIDYG TPASKSEKLV TLTIDGREIT VPEGTSIMRA AMEAGIEVPK LCASDMMDAF
GSCRLCLVEI DGRAGMPASC TTPVSAGISV STQTQRLKDV RRGVMELYIS DHPLDCLTCA
ANGDCELQDM AGAVGLRDVR YGYDGENHVT ARNNGEINAK WMPKDESNPY FTYDPAKCIV
CSRCVRACEE VQGTFALTIS GRGFDSRVSA GMNEDFVSSE CVSCGACVQA CPTATLTEKS
VIEIGQPEHS VVTTCAYCGV GCSFKAEMRG EELVRMVPWK DGQANRGHSC VKGRFAYGYS
NHKDRILNPM IREKVTDAWR EVTWEEAFAH VASEFRRIQY QYGRDSVGGI TSSRCTNEET
FLVQKLVRAG FGNNNVDTCA RVCHSPTGYG LNQTFGTSAG TQDFDSVEHT DVAVIIGANP
TDGHPVFASR LKKRLRQGAK LIVIDPRRID LVRSAHVEAS YHLPLKPGTN VAILTALAHV
IVTEGIGNEA FIRERCDWSE FEDWAAFVAE PHHSPEATAA YTGVRADLVR GAARLYATGG
NGAIYYGLGV TEHSQGSTTV MAIANLAMLT GNIGRPGVGV NPLRGQNNVQ GSCDMGSFPH
ELPGYRHISD DATREIFEKL WGVKLNHEPG LRIPNMLDAA VEGTFKGLYV QGEDILQSDP
DTKHVAAGLA AMECVVVHDL FLNETANYAH VFLPGSTFFE KDGTFTNAER RINRVRRVMR
PKNGYADWEV TQKMAQAMGL AWNYRHPSEI MDEIAATTPS FAMVSYDYLD KMGSVQWPCN
EKAPLGSPIM HVDGFVRGKG KFIRTEYVAT DERTGPRFPL LLTTGRILSQ YNVGAQTRRT
ENVVWHAEDR LEIHPHDAEQ RGIRDGDWVR LASRSGDTTL RALITDRVAP GVVYTTFHHP
STQANVITTD FTDWATNCPE YKVTAVQVSP SNGPSDWQRD YDEQARQSRR IAGKLEAAE
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