Gene Smed_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2886 
Symbol 
ID5323763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3022256 
End bp3023128 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content61% 
IMG OID640791838 
Productalpha/beta hydrolase fold 
Protein accessionYP_001328551 
Protein GI150398084 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAG AAATTTCCGT AAAACACCGT TTCGCCGATT TGGACGGCCT ACGCGTCTTC 
TATCGCGAAG CCGGACCGAA GGACGCGCCG GTAGTGCTCC TCCCGCACGG CTATCCCTGC
TCGTCATACG AGTTCCGCAA TTTCATGCCG CGCCTGGCCG ACCGCTGGAG GCTCCTCGCT
CCGGATTTTC CCGGGTCGGG ATATAGCGAC ACGCCGGGCG GGTTCGCCTA CGACTTCGAC
GGGTTCACCG ATTTGCTCGA TGCCTTCATC CGGCGCCTGG GCCTGGAGAG ATTCGCACTT
TATTTGCATG ATTTCGGATC GCAGATCGGG CTTCGGCTGG CGATGCGCCG TCCTGAGCGG
ATTACGGCGC TTATCATTCA AAATGGCGAC ATCTACGAAG ATGAGCTTGG TCCGAAATAC
GCGCCGTTGC AGGCCTATTT CCGCAATCCT ACGCCGGAAG GCCGATCCAT GCTCGGTAAA
GCCGTCAGCG AGGAGGGATA CCGCGACGAG TTTCTCAACG ATGTCCGGCC CGAACTTGCC
GAACGGATTT CTCCCGACCT CTGGAAACTT CATTGGTCGC TGACGACGGC CCGGCGGCGG
GAGATCGCGA TAGACGTCAT CGCCGGGTTG CGGGAAAATC TCGCATGGTT CCCCCGCTAT
CAGGCCTATC TGCATGAGCA TCGGCCGCCT ACGCTGATCG TCTGGGGTCC ACAGGACGGC
TACATGCCCG AGGGCTCTGC TCGAGCCTAT CTCCGCGATC TGCCCGACGC CGAATTGCAT
CTGCTCGACG GAGGCCATTG GCTGCTGGAG ACGAACCTGT CCGAGGTCGT TTCCCTCTCA
CGGGATTTCC TCACGCGCGC GGCACCGGGG TGA
 
Protein sequence
MKSEISVKHR FADLDGLRVF YREAGPKDAP VVLLPHGYPC SSYEFRNFMP RLADRWRLLA 
PDFPGSGYSD TPGGFAYDFD GFTDLLDAFI RRLGLERFAL YLHDFGSQIG LRLAMRRPER
ITALIIQNGD IYEDELGPKY APLQAYFRNP TPEGRSMLGK AVSEEGYRDE FLNDVRPELA
ERISPDLWKL HWSLTTARRR EIAIDVIAGL RENLAWFPRY QAYLHEHRPP TLIVWGPQDG
YMPEGSARAY LRDLPDAELH LLDGGHWLLE TNLSEVVSLS RDFLTRAAPG