| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2848 |
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| Symbol | |
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| ID | 5323718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2974630 |
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| End bp | 2975601 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791793 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001328513 |
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| Protein GI | 150398046 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.566323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.619807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGTC GTATGATTCT TACATATCCG GATGCAGCGC GGCGTACCGG GACATTTCTC
CTGCTCGCGC TGATAACCCT GATGGTCTAC AGCCTGGGCG TAAGCCCCGC CTGGATCGGC
ATGGTGCTGC CGACGAGCTC GGAATGGCTG GCCGCCAATC CGGCGCTCGG ACGGCTGGTC
AGCGCAGTCA TGATCGCCGT CATCGCGGCC CTGAACTGGA AGGCGCTCCG GCAGCTTCCC
CGCCATTGGC AGATTACCGG CGTCTGGCTG GAACTTTTCG TGCTGCTGAT GATCTTCTTC
TACTCCTTCA ATCTTTCCTT TGCGTTCATA GCCAAAAAGA TCAGCTTCCT GATTTCACAG
GGTGTCGTCA CGACGCTCTA CATTTCGGTG ATCTCGATTG CGGTCGCGAC GGTCATCGCG
CTCCTCGGCG CCATCGCAAA ACTGTCGAGA AATGGGGTGA TCTACGGTCT GGCGACCTTC
TATACGTCGC TGTTCCGCGG CCTGCCGCTC CTGATGCAGA TCTACATCAT CTATCTCGGT
CTGCCGCAGG TCGGTTACGT CATCAGCGCC GTGCCGGCCG GCATCCTTGC ACTTTCGCTC
TGCTACGGCG CCTATATGAC CGAAATCTTC CGGGCGGGCA TCGAGAGTAT CCCGCGGGGC
CAGTCGGAAG GTGCAACCGC ACTCGGGTTG AGCCCGAGCC AGACGATGGG TCTGGTGATC
CTGCCGCAGG CGATGCGCGT GATCATCCCG CCGACCGGAA ACCAGTTCAT CGCGATGCTG
AAGGACTCCT CGCTGATCTC CGTCGTGGGC GTCTGGGAAC TGATGTATCT CGCCCGCACA
CAGGGACAGA CCGAGTTCCG CCACATCGAA ATGCTGATCA CCGCCTCCAT GATCTACTGG
ATCCTTTCGA TCGGGCTCGA ATTCATTCAG TCCCGTATCG AAGCACGGTT CGGGCGTTTC
AATGTCCGTT GA
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| Protein sequence | MIGRMILTYP DAARRTGTFL LLALITLMVY SLGVSPAWIG MVLPTSSEWL AANPALGRLV
SAVMIAVIAA LNWKALRQLP RHWQITGVWL ELFVLLMIFF YSFNLSFAFI AKKISFLISQ
GVVTTLYISV ISIAVATVIA LLGAIAKLSR NGVIYGLATF YTSLFRGLPL LMQIYIIYLG
LPQVGYVISA VPAGILALSL CYGAYMTEIF RAGIESIPRG QSEGATALGL SPSQTMGLVI
LPQAMRVIIP PTGNQFIAML KDSSLISVVG VWELMYLART QGQTEFRHIE MLITASMIYW
ILSIGLEFIQ SRIEARFGRF NVR
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