| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2836 |
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| Symbol | |
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| ID | 5323706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2960806 |
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| End bp | 2961918 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791781 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001328501 |
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| Protein GI | 150398034 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000134458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCAT TTCCACATGA CGCACCGCCG CCGGCGATCT CGGCGGACAA TCCCGCCGGA
ACCGACGGGT TCGAGTTCGT CGAATTCGCC CATCCGGAAC CGGAGAAGCT TGCGGAACTC
TTCGGCCGCA TGGGCTACGC ACCGGTTGCC AGGCACAGGA CGAAGGACAT CACGATATGG
CGACAGGGCG ACATCAACTA TGTCCTGAAT GCTGAAGCCG GCTCGCATGC CATGCGCTTC
GTCGGAGAAC ACGGGCCCTG CGCCCCGTCG ATGGCCTGGC GCGTCGTCGA CGCGAAGCAT
GCCTTCGAGC ACGCCGTATC GAACGGCGCC GAGGCCTATA CCGGCAACGA CAAGAGCCTG
GACGTACCGG CGATCGTCGG CATCGGCGGC TCGCTTCTCT ATTTCGTGGA AGTTTACGGC
GAGAAAGGGT CCGCTTACGA TGCCGAGTTC GAATGGCTGC GCGAGCGTGA TCCGAAGCCG
GCCGGCGTCG GCTTCTATTA TCTCGACCAC CTGACCCACA ATGTCTATCG CGGCAATATG
GACAAGTGGT GGGCCTTCTA TCGCGAACTG TTCAATTTCA AACAGATCCA TTTCTTCGAC
ATCGACGGCC GCATCACCGG CCTCGTCAGC CGGGCGATCA CCTCACCTTG CGGCAAGATT
CGCATCCCAC TGAACGAATC GAAGGACGAC ACCAGCCAGA TCGAGGAATA TCTGACGAAG
TACAAAGGCG AAGGCATACA GCACATCGCG GTCGGTACCG AGGCGATCTA CGATGCGACC
GACAAACTCG CGGCAAACGG TCTGAAGTTC ATGCCGGGAC CGCCTGAAAC CTATTATGAG
ATGTCCCACC AGCGCGTTCG CGGACACGAC GAACCGATCG ACCGGATGAA GAAACATGGC
ATCCTGATCG ATGGAGAGGG TGTGGTGAAT GGCGGCATGA CGAAGATTCT GCTGCAGATC
TTCTCGCGCA CCGTGATCGG ACCAATCTTC TTCGAATTCA TTCAGCGCAA GGGTGACGAA
GGCTTCGGCG AGGGCAACTT CAGAGCATTG TTCGAATCGA TCGAGGCCGA CCAGATCCGC
CGCGGCGTAC TTGGCCACGA GGCGGCCGAG TAG
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| Protein sequence | MGPFPHDAPP PAISADNPAG TDGFEFVEFA HPEPEKLAEL FGRMGYAPVA RHRTKDITIW
RQGDINYVLN AEAGSHAMRF VGEHGPCAPS MAWRVVDAKH AFEHAVSNGA EAYTGNDKSL
DVPAIVGIGG SLLYFVEVYG EKGSAYDAEF EWLRERDPKP AGVGFYYLDH LTHNVYRGNM
DKWWAFYREL FNFKQIHFFD IDGRITGLVS RAITSPCGKI RIPLNESKDD TSQIEEYLTK
YKGEGIQHIA VGTEAIYDAT DKLAANGLKF MPGPPETYYE MSHQRVRGHD EPIDRMKKHG
ILIDGEGVVN GGMTKILLQI FSRTVIGPIF FEFIQRKGDE GFGEGNFRAL FESIEADQIR
RGVLGHEAAE
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