Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2783 |
Symbol | |
ID | 5323653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2901116 |
End bp | 2901892 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791728 |
Product | YaeC family lipoprotein |
Protein accession | YP_001328448 |
Protein GI | 150397981 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TCATTCTCGC GGCGGCTCTT GCCGCGCTCA CCGCCGGCAC GGCACTCGCA GAGACGATCA AGGTCGGCGT AACCCCGGGC GAGCACGCCG AGATCATGGA GAAGGTGAAG GAAGTCGCCG CTCCGAAGGG CCTCGACATC GAGATACTCG AATTCTCCGA CTACGTCGTT CCGAACCAGG CGCTGGCCGA CGGCGACCTC AATGCCAATT CTTTCCAGCA TCAGCCCTAT CTCGACAACC AGATCGCCGA CCGGGGCTTC GACATCGTCA GCGTTGGCCT GACCATCACC ACGCCCATGG GTGTCTATTC GAATAAGGTG AAGAGCCTCG ATGAACTGGA GGACGGCGCA ACGGTCGCTA TTCCCAACGA TCCGACCAAT GGCGGTCGCG CTCTCCTTGT TCTCGCGTCG AAGGGCCTGA TCAAGGTCAA TGCGGATGTC GGGCTGAAGG TCACGCCGGC CGACGTGACG GAAAATCCTA AGAACATCCA GTTTGCCGAG CTCGATGCGG CTCAACTGCC ACGCTCGCTG GCCGATGTCG ACGCAGCCGT GATCAACACC AACTACGCAC TCGAGGCTGA CCTTCACCCC AAGGAGGACG CGATTGCCAT CGAGAGCGAC AAGTCTCCCT ACGCCAACGT CATCGCTGTG CGTGCAGCGG ACAAGGACGC GCCCTGGGTG AAGACGCTGG TCGAAGCCTA CCATGACGAG AAGATCAAGA CCTTCATCGT CGAGCACTTC AAGGGCGCGC TCATACCGAG CTGGTGA
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Protein sequence | MKKLILAAAL AALTAGTALA ETIKVGVTPG EHAEIMEKVK EVAAPKGLDI EILEFSDYVV PNQALADGDL NANSFQHQPY LDNQIADRGF DIVSVGLTIT TPMGVYSNKV KSLDELEDGA TVAIPNDPTN GGRALLVLAS KGLIKVNADV GLKVTPADVT ENPKNIQFAE LDAAQLPRSL ADVDAAVINT NYALEADLHP KEDAIAIESD KSPYANVIAV RAADKDAPWV KTLVEAYHDE KIKTFIVEHF KGALIPSW
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