Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2716 |
Symbol | |
ID | 5323585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2830247 |
End bp | 2831260 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791660 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001328381 |
Protein GI | 150397914 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.112719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC GCCTCCATGA CCACGCTCCC ATGACCACGC TCCTCCAGTC GATGCCGCAA AATCCGCTTC CAGGCGATCC CGTGGTAGGC TTCTTCGACG GGGCCGATGA GCGCAAGATC CGCTACGCGG TGTTCAAGTC GCGAGCGCCC GTCATTCGCG GCACGATCGT GCTGCTGCAG GGCCGCAATG AGTCGATCGA GAAATACTTC GAAACGATCG GCGAGCTCAT GGCGGCCGGC TTCTGGGTTG CGACCTTCGA CTGGCGCGGA CAGGGCGGCT CCGAACGGCT TTCGCCGCAC CGGACCCGCG GGCATGTGGA ACATTTCGCC GATTACGAGC GCGATCTGAC GAGATTTCTC GATGAAATCG TCCTGCCCGA CACCCGCCTG CCCTTCTCGA TCGTCGCCCA TTCCATGGGC GCGCTCGTCG CCCTGTCGCT CGCCCCCATG CTTGCAAGCC GCATAGACCG AATGGTTCTG CTCGCCCCCT TCGTCGGCCT GGGCGGTCAG GCGATCAGCG AACGGGGTAT CGCGGCCATC GCGACCATCA TGCGGTTGCT CGGTCTTGGA AGGCTGCCGC TGAGTGCCGA CAGGGACAAA CGCGCGCAGT TCAAGGGCAA TGTACTGACC TCGGATGACC GCCGCTACCG CCGCAACCTG GCACTCATCG ATGCGCGTCC TCAATTGCGG GTCGGCCCAC CTACAGCCCG CTGGCTGAGC GAAGCCTTCG CAACTATGCG GCGTGTACTC CGACACGAAC ATCTGACGAG AATCACCATA CCGACCGTCA TACTCGCACC GACCGCCGAC AGGCTGGTGC CCTATGTCCC GGTCGAATAT CTCGCAAGCA ATTTCCGCGC GGGGCATTTG ATCCCGATCG ACGGTGCGCG GCACGAACTC CTGCAGGAGG CCGACCGCTA TCGCGCCCAG GCGATGGCCG CAATCTTCGC TTTCCTGCCC GGTGCGGACG CCGAGGACCC CGGCTCCCTG CCTCGGCAGC TGGAAGAGGC TTAG
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Protein sequence | MNARLHDHAP MTTLLQSMPQ NPLPGDPVVG FFDGADERKI RYAVFKSRAP VIRGTIVLLQ GRNESIEKYF ETIGELMAAG FWVATFDWRG QGGSERLSPH RTRGHVEHFA DYERDLTRFL DEIVLPDTRL PFSIVAHSMG ALVALSLAPM LASRIDRMVL LAPFVGLGGQ AISERGIAAI ATIMRLLGLG RLPLSADRDK RAQFKGNVLT SDDRRYRRNL ALIDARPQLR VGPPTARWLS EAFATMRRVL RHEHLTRITI PTVILAPTAD RLVPYVPVEY LASNFRAGHL IPIDGARHEL LQEADRYRAQ AMAAIFAFLP GADAEDPGSL PRQLEEA
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