Gene Smed_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2700 
Symbol 
ID5323569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2807498 
End bp2808310 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID640791644 
ProductHAD family hydrolase 
Protein accessionYP_001328365 
Protein GI150397898 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGG TTGCCGAGAT GCCGACCGAA ATCGCTGCCC GTATCACGGT GCTTTTCGCC 
GACATCGACG ATACGCTGAC CAATGAGGGG CGGCTGCCGG CCGCGGCATA TGACGCCGTG
GAACGCCTCA CGGAAGAGGG GATCTCGGTG GCTCCGATTA CCGGCCGGCC GGCCGGCTGG
TGCGATATGA TCGCGCGTAT GTGGCCGGTC GCGGGGGTCG TCGGTGAAAA CGGCGCCTTC
TATTTCGCCT ACGACCAGGC GCAGCGCCGA ATGCGTCGCA GCTTCGCAAT CGCCGATGTA
CAGCGCGCGG CCGACCGCGA GAGGCTTGCC GAAGTGGGCA CCCGCATCCT CTCGGAGGTG
CATGGGGCGG CGATCTCCGC CGACCAGCTC TACCGTGAGG CCGACCTCGC CATCGATTTC
TGCGAGGATG TTCCTGCACT TCCGGTTTCC GACGTGGAGC GCATCAAGCG CATCTTCGAG
GAGGAAGGTG CTACTGCCAA GGTCTCTTCC ATCCATGTCA ACGGCTGGTA TGGGGCTTAT
GACAAGCTGA CCATGACCCG CCGTTTTGCC GCCGATATCC TCGGCGTAGA TATCGACAGC
GAGCGCGATA GGATCGTCTT CGTCGGCGAC AGCCCGAACG ACGCGCCCAT GTTCGGCTTC
TTTCCCAATG CCTGTGGCGT TGCGAATGTT CTCGCCTTCA GGGGCCGCAT CGATGCGGAG
CCGGCCTATG TGGCCGCACG CGAGGGCGGG CACGGCTTCG TCGAAGTGGC GAACCGCATC
CTCGACGCGC GGTCGGGAAA GCACGCGGCA TGA
 
Protein sequence
MRAVAEMPTE IAARITVLFA DIDDTLTNEG RLPAAAYDAV ERLTEEGISV APITGRPAGW 
CDMIARMWPV AGVVGENGAF YFAYDQAQRR MRRSFAIADV QRAADRERLA EVGTRILSEV
HGAAISADQL YREADLAIDF CEDVPALPVS DVERIKRIFE EEGATAKVSS IHVNGWYGAY
DKLTMTRRFA ADILGVDIDS ERDRIVFVGD SPNDAPMFGF FPNACGVANV LAFRGRIDAE
PAYVAAREGG HGFVEVANRI LDARSGKHAA