Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2700 |
Symbol | |
ID | 5323569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2807498 |
End bp | 2808310 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791644 |
Product | HAD family hydrolase |
Protein accession | YP_001328365 |
Protein GI | 150397898 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCGG TTGCCGAGAT GCCGACCGAA ATCGCTGCCC GTATCACGGT GCTTTTCGCC GACATCGACG ATACGCTGAC CAATGAGGGG CGGCTGCCGG CCGCGGCATA TGACGCCGTG GAACGCCTCA CGGAAGAGGG GATCTCGGTG GCTCCGATTA CCGGCCGGCC GGCCGGCTGG TGCGATATGA TCGCGCGTAT GTGGCCGGTC GCGGGGGTCG TCGGTGAAAA CGGCGCCTTC TATTTCGCCT ACGACCAGGC GCAGCGCCGA ATGCGTCGCA GCTTCGCAAT CGCCGATGTA CAGCGCGCGG CCGACCGCGA GAGGCTTGCC GAAGTGGGCA CCCGCATCCT CTCGGAGGTG CATGGGGCGG CGATCTCCGC CGACCAGCTC TACCGTGAGG CCGACCTCGC CATCGATTTC TGCGAGGATG TTCCTGCACT TCCGGTTTCC GACGTGGAGC GCATCAAGCG CATCTTCGAG GAGGAAGGTG CTACTGCCAA GGTCTCTTCC ATCCATGTCA ACGGCTGGTA TGGGGCTTAT GACAAGCTGA CCATGACCCG CCGTTTTGCC GCCGATATCC TCGGCGTAGA TATCGACAGC GAGCGCGATA GGATCGTCTT CGTCGGCGAC AGCCCGAACG ACGCGCCCAT GTTCGGCTTC TTTCCCAATG CCTGTGGCGT TGCGAATGTT CTCGCCTTCA GGGGCCGCAT CGATGCGGAG CCGGCCTATG TGGCCGCACG CGAGGGCGGG CACGGCTTCG TCGAAGTGGC GAACCGCATC CTCGACGCGC GGTCGGGAAA GCACGCGGCA TGA
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Protein sequence | MRAVAEMPTE IAARITVLFA DIDDTLTNEG RLPAAAYDAV ERLTEEGISV APITGRPAGW CDMIARMWPV AGVVGENGAF YFAYDQAQRR MRRSFAIADV QRAADRERLA EVGTRILSEV HGAAISADQL YREADLAIDF CEDVPALPVS DVERIKRIFE EEGATAKVSS IHVNGWYGAY DKLTMTRRFA ADILGVDIDS ERDRIVFVGD SPNDAPMFGF FPNACGVANV LAFRGRIDAE PAYVAAREGG HGFVEVANRI LDARSGKHAA
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