| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2662 |
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| Symbol | |
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| ID | 5323531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2766247 |
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| End bp | 2768040 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791606 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_001328327 |
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| Protein GI | 150397860 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCGC GCAGGTCCAT CCGCCCGCTC GCAACCGTAC TGCCTTACCT CGCCCGCTAC
CGCGGCCTTG CGATCGGCGC TGGCCTTTCC CTGACCGCCG CAGCGGTTAC GACGCTGACA
TTGCCGATGG CCGTTCGCCG TATGATAGAC CACGGCTTCT CCAATTCCGA TTCCGGCTTC
ATCAACACCT ATTTCTCCAT GCTGATGGTG CTTGCGGTGA TCCTCGCCCT TGCCAGCGCC
GCCCGCTACT ATTTCGTCAT CTCGCTGGGC GAGCGCATCG TTGCCGACCT CAGACGCGAC
GTCTTCGCAC GCGTCATGCA GCTCTCGGCA TCCTTCTTCG ACGTCAATCA GTCCGGTGAG
ATCGTATCGC GGCTGACTGC CGACACGACA CAGATCAAAT CGGCGGTGGG CGCGACGGCA
TCGGTGGCGC TGCGCAACCT CATCCTCTGT CTCGGCGCTA TGGGCATGAT GGTCTATACG
AGCCCGAAGC TTTCGAGCCT GGTGCTCGCC GCGATCCCCG TCATAGTCTT TCCGCTCGTC
GGCTTCGGCC GCTCGGTACG CCGGCGCTCC CGCGAAGCGC AGGATATGCT TGCGGCGGCT
TCCGCCTATG CCGGCGAAAC GATCGCCGCC ACCCGTACGG TGCAGGCTTT CAACGGTGTG
GAGAGCGCGC GTTTGCGCTT CGGCAACTCG GTGGAGGCCG CCTATCGTGC CGCCCGCGCT
GCAACAAAAG CGCGCTCGGT GCTGACCGCC TTTGCCATCA CGATGATCTT CGGAAGCGTC
GTCGCCGTGC TCTGGTTCGG CGCAAGGGAC GTCCTCTCAG GCTCGCTTTC CGCCGGTACT
CTCGGTCAGT TCCTGCTCTA CTCCGTTTTC GCGGCGGGCA GTCTCGGCGC GCTGTCGGAG
GTCTGGGGCG AACTCTCACA GGCGGCGGGC GCCGCCGAAC GCCTGAACGA GCTTCTGAGC
GAAGTCCCTG AAATTCGCGC GCCGGAGTGT CCGGTCGCAA TGCCCGCACC TGCGACAGGG
GCGGTCGAGT TCGACGACGT GCACTTCGCC TATCCCGCCC GGCCGGATTA CAAGAGTCTC
CGGGGCCTGA GCTTTGCGAT AAGGCCGGGC GAGACGGTAG CCATCGTCGG CCCATCCGGC
GCCGGCAAGA GCACGGTCTT CTCGATGCTC CTGCGTTACT ACGACCCGGC AAAGGGCACC
ATCCGCGTCG ACGGTACGGA TGTGCGCGCC GTCGATCCCG AAGAACTGCG TGAGAGACTA
GCGATCGTGC CCCAGGACGT GACCATCTTC GCCACCTCGG TGCACGACAA CATCGCGTTC
GGCGTGCCGG ACGCAAGCCG CGAAGCGGTG CGCGCAGCCG CTGTCGCGGC GCAGGCCGAA
GAGTTCATCG GCAGGCTTGA TCACGGCTAC GACACGCTGG TCGGCGAGCG CGGGGTGACC
CTTTCAGGCG GCCAGCGCCA GCGCATAGCC ATCGCGCGCG CCATCCTGAA AGACGCTCCC
ATCCTTCTTC TCGACGAGGC CACCTCGGCG CTGGATGCGG AAAGCGAGAC GCTGGTGCAA
AAGGCGCTTG ACGGCCTGAT GAAGGAGCGC ACGACGCTCG TCATCGCCCA TAGGCTCGCG
ACCGTTCTCA AGGCGGACCG CATCCTGGTG ATGGAACATG GCCGCATCGT CGAGGAAGGC
ACCCACGAGT CCCTGATCCG CCAGGGCGGG CTTTATGCGA AGCTTGCGCG GCTCCAGTTC
GATCACGGCG CAGAAGCGCT GTTCGTCGCT TCGCCCGCGC CTGTTTCTCC GTGA
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| Protein sequence | MPARRSIRPL ATVLPYLARY RGLAIGAGLS LTAAAVTTLT LPMAVRRMID HGFSNSDSGF
INTYFSMLMV LAVILALASA ARYYFVISLG ERIVADLRRD VFARVMQLSA SFFDVNQSGE
IVSRLTADTT QIKSAVGATA SVALRNLILC LGAMGMMVYT SPKLSSLVLA AIPVIVFPLV
GFGRSVRRRS REAQDMLAAA SAYAGETIAA TRTVQAFNGV ESARLRFGNS VEAAYRAARA
ATKARSVLTA FAITMIFGSV VAVLWFGARD VLSGSLSAGT LGQFLLYSVF AAGSLGALSE
VWGELSQAAG AAERLNELLS EVPEIRAPEC PVAMPAPATG AVEFDDVHFA YPARPDYKSL
RGLSFAIRPG ETVAIVGPSG AGKSTVFSML LRYYDPAKGT IRVDGTDVRA VDPEELRERL
AIVPQDVTIF ATSVHDNIAF GVPDASREAV RAAAVAAQAE EFIGRLDHGY DTLVGERGVT
LSGGQRQRIA IARAILKDAP ILLLDEATSA LDAESETLVQ KALDGLMKER TTLVIAHRLA
TVLKADRILV MEHGRIVEEG THESLIRQGG LYAKLARLQF DHGAEALFVA SPAPVSP
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