| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2629 |
|---|
| Symbol | |
|---|
| ID | 5323498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2729986 |
|---|
| End bp | 2730435 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640791573 |
|---|
| Product | biopolymer transport TolR |
|---|
| Protein accession | YP_001328294 |
|---|
| Protein GI | 150397827 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATGG CAGTTGGGGG AGCCAAAGGG TCGGGCGGCA GGCGCCGCCG CAGCGGCAGA
AGAAGCGCGA TCAGCGAGAT CAACGTCACG CCTCTCGTCG ACGTCATGCT TGTTCTGCTC
ATCATCTTCA TGGTGGCTGC GCCCATGATG ACGGTTGGCG TGCCTATCGA CCTGCCGGAA
ACGCAGGCGA AAGCGATGAA CGCCGACACC CAGCCGATCA CTGTCTCGGT CAACCCCGCA
GGCGAAATCT TCCTGCAGGA AACGCCGATC GCGATCGACG AGATCGTGCC GAAGCTCGAG
GCGATCGCCA CCACCGGCTA CAACGAGCGC ATCTACGTGC GCGGCGACAC CAATGCCGAT
TACGGCACCG TGATGCAGGT GATGGCGCGC ATCTCCGCGG CAGGCTTCAA GAACCTGGGT
CTGGTAACGC TTCAAGAACA AGAGAAGTGA
|
|---|
| Protein sequence | MGMAVGGAKG SGGRRRRSGR RSAISEINVT PLVDVMLVLL IIFMVAAPMM TVGVPIDLPE
TQAKAMNADT QPITVSVNPA GEIFLQETPI AIDEIVPKLE AIATTGYNER IYVRGDTNAD
YGTVMQVMAR ISAAGFKNLG LVTLQEQEK
|
|---|
| |